DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and CG31262

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001138069.2 Gene:CG31262 / 318649 FlyBaseID:FBgn0051262 Length:579 Species:Drosophila melanogaster


Alignment Length:571 Identity:122/571 - (21%)
Similarity:232/571 - (40%) Gaps:147/571 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVLFYLLILVVGIWAG----------------RKKQSGNDSEEEVMLAGRS---IGLFVGIFTMT 55
            :|...||....||:.|                |:...|::..:|.::..|:   |.:.:.::.:|
  Fly    14 LVAMTLLSTGTGIYFGALKKKHKNKKSVSEDNRRTNFGSEKIDEYLMGSRNMKVIPVSITLYRVT 78

  Fly    56 ATWVGGGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQ-----DS 115
            :       |.||...||..|..:    :...::::..||.|:     ..|:.:...||     :.
  Fly    79 S-------IIGTPSEIYHYGTQY----YLIIVAIILQGIAFS-----YVYLPVYSALQIGSAYEY 127

  Fly   116 FGERMGGLLFLPALCGEVFWAAGILAAL-------GATLSVIIDMD-HRTS-VILSSCIAIFYTL 171
            .|.|...::...|....||   |||..|       ..:||.:..:: |... ||:.:|:.  ||.
  Fly   128 LGLRFNSIIRTTASFMYVF---GILTYLPFIVYVPALSLSQVSGLNTHLIGLVIILACVT--YTF 187

  Fly   172 FGGLYSVAYTDVIQLFCIFIGLWMCIPFA---WSNEHVGSLSDLEVD---WIGHVEPKKHWLYID 230
            .|||.:|.:|||.|:..:|:.| :.:.|.   :||..|....|.|..   .:.:..|..:..:..
  Fly   188 MGGLKAVVHTDVWQVAVMFLSL-VAVAFLAIYYSNGLVAVFDDAEQGGRLMLANTNPSPYVRHTV 251

  Fly   231 YGLLLVFGGIP-W-------QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATP 287
            :.:|:  ||.. |       |...||.:|..:..:::..|::...|..:.......:|.:. .:.
  Fly   252 WSVLI--GGFSFWTSVNAGGQHMVQRYMSLPSLKKSRQASFIFTIGVSIFIALCCFMGLLL-FSK 313

  Fly   288 WNETDYKGPYPLTVDETSMILPM-VLQ-----YLTPD-FVS-FFGLGAVSAAVMSSADSSVLSAA 344
            :.:.|.:....:..|:  .:||: |:|     |..|. |:: .||.|      :||..|...:.:
  Fly   314 YKDCDPRSAGMILNDD--QLLPLFVVQSVGHIYGMPGLFIAGIFGAG------LSSLSSCFNTVS 370

  Fly   345 SMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYV------ 403
            .:|..::.:..|:.:.||.:...:::..||..||||.::...:..:.|:.|:|:.:..:      
  Fly   371 MVFLEDIVRGFFKMEPSERQSTILIKTCIIFQGILAFLIVFLLQHLRGILSVCNSISSITAGTSF 435

  Fly   404 ------ILFPQLLMVVHFKKHCNTYGS----LSAYIVA------LAIRLSGGEAILGLAP----- 447
                  :|||          ..||.|:    ||:.::|      ..|..:.|:...|:.|     
  Fly   436 GVFTLGMLFP----------WANTIGTAVGGLSSVLLAGWISFGSQIAAASGQLKSGMLPVSVKE 490

  Fly   448 ------LIKYPGYDEETKEQMFP-FR------------TMAMLLSLVTLIS 479
                  |.:.|..|:   :|:|| :|            |..::.:||:||:
  Fly   491 CVGNVTLPEDPWVDQ---DQVFPLYRLSYHWVSPIGVVTAVVVGALVSLIT 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 122/571 (21%)
CG31262NP_001138069.2 SLC5sbd_NIS-SMVT 9..522 CDD:271383 117/553 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448262
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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