DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and SPBC23G7.13c

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_595871.1 Gene:SPBC23G7.13c / 2540527 PomBaseID:SPBC23G7.13c Length:664 Species:Schizosaccharomyces pombe


Alignment Length:556 Identity:113/556 - (20%)
Similarity:211/556 - (37%) Gaps:107/556 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAEAI 71
            ||.:.|.:..:::...|:.:|..:.|.:.|....|..|:...:....:.::|.....:..:|:..
pombe    15 VVGLGLGFAALMIFVSWSLKKFNNENQTSEHFNTASHSVRTGLVASAVVSSWTWASTLLTSAQKT 79

  Fly    72 Y---TSGLVWCQAPFGYALSLVFGGIFFANPMRK-QGYITMLDPLQDSFGERMGGLLFLPALCGE 132
            |   .||..|..:  |..:.::...:......|| ....|.|:.::...|....|:..:.|....
pombe    80 YQYGVSGAFWYAS--GACVQILLFTVLAIELKRKAPNAHTFLEVVRARCGPIAHGVFLVFAYITN 142

  Fly   133 VFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMCI 197
            :...|.:|....||:|.:..|:......|.....|.||:|||:.:...||.|....|.:.|.|..
pombe   143 ILVMAMLLCGGSATISSVTGMNTVAVCFLLPVGVIIYTMFGGIKATFLTDYIHTVIILVILIMFS 207

  Fly   198 PFAWS-NEHVGS---LSDLEVDWIGHVEP---KKHWLYI-----------------DYGLLLVFG 238
            ...:| ::.:||   |.|: :...|...|   .....|:                 ::|.:.|..
pombe   208 LATYSADKKIGSPGKLYDM-LKEAGDAHPVAGNAQGSYLTMRSQEGAIFFIINLAGNFGTVFVDN 271

  Fly   239 GIPWQVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIA-KATPW-------------N 289
            |     |:|:.:::..|.                |:|..::|.:| .|.||             .
pombe   272 G-----YWQKAIAANPAS----------------ALPGYILGGLAWFAIPWLAATTMGLVALGLE 315

  Fly   290 ETDYKGPYPLTVDETSMILPMVLQYLTPDFVSFFGLGA----VSAAVMSSADSSVLSAASMFARN 350
            ...|...||..:.:..:...:||.|.....:...|..|    |..||.|:|.:.:::.:|:|..:
pombe   316 NKPYFPTYPNRMSDLEVSEGLVLPYAAIALMGRAGANATLLLVFMAVTSAASAELIAVSSIFTYD 380

  Fly   351 VYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSM-----------CSDLV--- 401
            :||...|.:|:..|:::....::||.|...:..|..:  .||..||           |..:|   
pombe   381 IYKQYVRPRATGKELLYTGHASLIVFGFAMSGFATGL--YYGQVSMGYLYLLMGVLVCPAVVPAT 443

  Fly   402 YVILFPQLLMVVHFKKHCNTYGSLSAYIVALAI-RLSGGEAILGLAPLIKYPGYDEETKEQMFPF 465
            .|:||.::..:.  .......|.:|:.|..|.: |..||:.:     .|:..|    ....|...
pombe   444 CVMLFSRVSTIA--VTVSPVLGIISSIITWLVVARAEGGKTL-----TIETTG----ANNPMLAG 497

  Fly   466 RTMAMLLSLVTLISVSWWTKMMFESGKLPPSYDYFR 501
            ..:.:|...:.::.:|    ::|     |..||:.|
pombe   498 NVVGLLSPALYILILS----IIF-----PEKYDFNR 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 107/534 (20%)
SPBC23G7.13cNP_595871.1 SLC5sbd_DUR3 12..516 CDD:271370 108/541 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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