DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and Slc5a12

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001003915.1 Gene:Slc5a12 / 241612 MGIID:2138890 Length:623 Species:Mus musculus


Alignment Length:615 Identity:122/615 - (19%)
Similarity:230/615 - (37%) Gaps:156/615 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLFYLLILV---VGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAEAIY 72
            |:|..|.::   :|::...|::....| .|.::.||.:.......::||:::....:.||...:|
Mouse    12 VVFAGLFVISSGIGVFFAIKERKKTTS-REFLVGGRQMSFGPVALSLTASFMSAVTVLGTPAEVY 75

  Fly    73 TSGLVWCQAPFGYALSLVFGGIFFANPM-----RKQGYITMLDPLQDSFGERMGGLLFLPALCGE 132
            ..|..:    |.:.:|.|| .:||.:.:     .:.|..:..:.||..|.:.:.....:..:...
Mouse    76 RFGASF----FLFLISYVF-VVFFTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATIIYIVQT 135

  Fly   133 VFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMCI 197
            :.:...::.|....|:.:...:...||..:..:..||...|||.:|.:||..|:..:.:| ::.:
Mouse   136 ILYTGVVVYAPALALNQVTGFNLWASVFATGIVCTFYCSLGGLKAVVWTDAFQMVVMIVG-FLTV 199

  Fly   198 PFAWSNEHVGSLSD-LE----------VDWIGHVEP-KKHWLYIDYGLLLVFGGIPW-------Q 243
            ....|| |||..:: ||          ||:  .|:| ::|    .:..:.:.|...|       |
Mouse   200 LIQGSN-HVGGFNNVLEKAGNGSRLHIVDF--DVDPLRRH----TFWTITIGGTFTWLGVYGVNQ 257

  Fly   244 VYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAI-----AKATPWNETDYKGPYPLTVDE 303
            ...||.:|.||...|:|..|....|..::....|..|.|     ....||.......|       
Mouse   258 STIQRCISCKTEKHAKLALYFNLLGLWIIVACAVFSGLIMYSHFKDCDPWTSGVISAP------- 315

  Fly   304 TSMILPMVLQYLTPDFVSFFGLGAVSAA-----VMSSADSSVLSAASMFARNVYKLIFRQKASEM 363
             ..::|..:..:   |.:..||..:..|     .:|:..:|:.:.|::...:..|..|...:.::
Mouse   316 -DQLMPYFVMEI---FATMPGLPGLFVACAFSGTLSTVAASINALATVTFEDFVKSCFPHLSDKL 376

  Fly   364 EIIWVMRVAIIVVGILATIMALTIPSIYG----------------------LWSMCSDLVYVILF 406
            . .|:.:...|:.||:.|.||: :.|:.|                      |.|:|    |.:..
Mouse   377 S-TWISKGLCILFGIMCTSMAV-VASLMGSVVQAPGIVSQERAITGSFQRNLASVC----YGVSI 435

  Fly   407 PQLLMVVHFKKHCNTYGSLSAYI--VALAIRLSGGEAILGLAPLIKYPGYDEETKEQMFPF---- 465
            .:|:|           |:|...:  :.|:..::.|..|        ||.  .|:|....|.    
Mouse   436 WKLIM-----------GALGGLLTGITLSFWVAIGSFI--------YPA--PESKTLPLPLSTEH 479

  Fly   466 -------RTMAMLLSLVTLISVSWWTKMMFESGKLPPSYDYFRCVVNIPEDVQRVGDPSESGEQL 523
                   .|:|..:|...:::.:|::.          ||.||..|                 ..|
Mouse   480 CVELNITTTVAPQISSRPVLADTWYSL----------SYLYFSAV-----------------GCL 517

  Fly   524 SVMAGPLARSYGAATMAGKDERNGRINPAL 553
            ..:|..:..|:......|||     |:|.|
Mouse   518 GCIAAGIIISFLTGKQRGKD-----IDPLL 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 107/541 (20%)
Slc5a12NP_001003915.1 SLC5-6-like_sbd 3..531 CDD:294310 116/597 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836611
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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