DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and Slc5a8

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_663398.2 Gene:Slc5a8 / 216225 MGIID:2384916 Length:611 Species:Mus musculus


Alignment Length:550 Identity:121/550 - (22%)
Similarity:222/550 - (40%) Gaps:95/550 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLFYLLILV---VGIW---AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAE 69
            |:|..::|:   :||:   ||    .|..:.::.::.|||:.......::||:::....:.||..
Mouse    16 VVFAGMLLISAAIGIYYAFAG----GGQQTSKDFLMGGRSMSAVPVALSLTASFMSAVTVLGTPA 76

  Fly    70 AIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERM---GGLLFLPALCG 131
            .:|..|.::......|...:|.....|.....:.|..:..:.|:..|...:   |.:||   :..
Mouse    77 EVYRFGAIFSIFVITYFFVVVISAEVFLPVFYRLGITSTYEYLELRFNRCIRLCGTILF---IVQ 138

  Fly   132 EVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMC 196
            .:.:...::.|....|:.:...|...:|:.:..:..||...|||.:|.:|||.|:..:..|....
Mouse   139 TILYTGIVIYAPALALNQVTGFDLWGAVVATGVVCTFYCTLGGLKAVVWTDVFQVGIMVAGFASV 203

  Fly   197 IPFAWSNEHVGSLSDLEVD---------WIGHVEP-KKHWLYIDYGLLLVFGG-IPW-------Q 243
            |..|...:|  .::.:..|         |.....| ::|..:     .:|.|| ..|       |
Mouse   204 IIQASITQH--GINKILSDAFNGGRLNFWNFDPNPLQRHTFW-----TIVIGGTFTWTTIYGVNQ 261

  Fly   244 VYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYPLTVDETSMIL 308
            ...||.:|.|:...|:|..||...|..::....:..| :|..:.:.|.|     |.|..:.|.| 
Mouse   262 SQVQRYISCKSRLHAKLSLYVNLVGLWVILTCSIFCG-LALYSRYRECD-----PWTSKKVSAI- 319

  Fly   309 PMVLQYLTPDFVSFF----GLGAVSA--AVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIW 367
            ..::.||..|.:..:    ||....|  ..:|:..||:.:.|::...::.|..|: ..||..:.|
Mouse   320 DQLMPYLVLDILKNYPGVPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPRFK-SLSEKSLSW 383

  Fly   368 VMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLL------MVVHFKKHCNTYGSLS 426
            :.:...::.|.|...|| .:.|:.|.....:..::.::...||      ::|.|   .|:.|:|:
Mouse   384 ISQGMSVLYGALCIGMA-ALASLMGALLQAALSIFGMVGGPLLGLFSLGILVPF---ANSIGALT 444

  Fly   427 AYIVALAIRLSGG----------EAILGLAPL------IKYPGYDEETKEQMFPFRTMAMLLSLV 475
            ..:...||.|..|          |..|.| ||      |.:.|.|..:..:| ||.|.|..:...
Mouse   445 GLLAGFAISLWVGIGAQLYPPLPERTLPL-PLETYGCNITHNGSDWMSTTEM-PFSTSAFQIHNA 507

  Fly   476 --TLISVSWWTKMMFESGKLPPSYDYFRCV 503
              |.:..:|::.          ||.||..:
Mouse   508 ERTPLMDNWYSL----------SYLYFSTI 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 116/526 (22%)
Slc5a8NP_663398.2 SLC5sbd_SMCT1 7..549 CDD:271402 121/549 (22%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q8N695 609..611
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.