DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and Slc5a1

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_062784.3 Gene:Slc5a1 / 20537 MGIID:107678 Length:665 Species:Mus musculus


Alignment Length:679 Identity:151/679 - (22%)
Similarity:270/679 - (39%) Gaps:147/679 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYI--- 64
            |.|.:..||:::::::.||:||......|  :.....|||||:..:....::.|:.:|.|:.   
Mouse    25 NAADISVIVIYFVVVMAVGLWAMFSTNRG--TVGGFFLAGRSMVWWPIGASLFASNIGSGHFVGL 87

  Fly    65 --NGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMR-KQGYITMLDPLQDSFGER------- 119
              .|.|..|...|..|    ....|.:|.|.||.  |:. |.|.:||.:.|:..||.:       
Mouse    88 AGTGAAAGIAMGGFEW----NALVLVVVLGWIFV--PIYIKAGVVTMPEYLRKRFGGKRIQIYLS 146

  Fly   120 -MGGLLFL-PALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTD 182
             :..||:: ..:..::|..|       ..:::.:.:|...::.:...|...||:.|||.:|.|||
Mouse   147 VLSLLLYIFTKISADIFSGA-------IFINLALGLDIYLAIFILLAITALYTITGGLAAVIYTD 204

  Fly   183 VIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHVEPK--------KHWLYI----DYGLLL 235
            .:|...:.:|.::...||: || ||........::..:..|        |...|.    .:.:..
Mouse   205 TLQTAIMLVGSFILTGFAF-NE-VGGYEAFMDKYMKAIPTKVSNGNFTAKEECYTPRADSFHIFR 267

  Fly   236 --VFGGIPW------------------QVYFQRVLSSKTAGRAQ----LLSYVAAAGCILMAIPP 276
              :.|.:||                  ||..||.||:|.....:    |..|:......||.:|.
Mouse   268 DPITGDMPWPGLIFGLAILALWYWCTDQVIVQRCLSAKNMSHVKAGCTLCGYLKLLPMFLMVMPG 332

  Fly   277 VL-----IGAIAKATPWNETDYKGPYPLTVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSA 336
            ::     ...||...|.....|.|   ..|..|::..|.::..|.|:.:....|..:.|::|||.
Mouse   333 MISRILYTEKIACVLPEECQKYCG---TPVGCTNIAYPTLVVELMPNGLRGLMLSVMMASLMSSL 394

  Fly   337 DSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWS-MCSDL 400
            .|...||:::|..::|..| |:||||.|::...|:.|:|   |..|....:|.:....| ...|.
Mouse   395 TSIFNSASTLFTMDIYTKI-RKKASEKELMIAGRLFILV---LIGISIAWVPIVQSAQSGQLFDY 455

  Fly   401 VYVI---LFPQL---LMVVHFKKHCNTYGSLSAYIVALAIRLSGGEAILGLAPLIKYPGYDEETK 459
            :..|   |.|.:   .::..|.|..|..|:....|:..         ::|::.:|....|.  |.
Mouse   456 IQSITSYLGPPIAAVFLLAIFCKRVNEQGAFWGLILGF---------LIGISRMITEFAYG--TG 509

  Fly   460 EQMFP--------------FRTMAMLLSLVTLISVSWWTKMMFESGKLPPSYDYFRC-------- 502
            ..|.|              |..:..::|::|::.:|:.||      .:|..:.|..|        
Mouse   510 SCMEPSNCPKIICGVHYLYFAIILFVISVITILIISFLTK------PIPDVHLYRLCWSLRNSKE 568

  Fly   503 ---------VVNIPEDVQRVGDPSESGEQLSVMAGPLARSYGAATMAGKDERNGRINPALESDDD 558
                     ..:||||.:...:......|..  .|...|:|.  ...|.|:..|   |.:..:::
Mouse   569 ERIDLDAGEEEDIPEDSKDTIEIDTEAPQKK--KGCFRRAYD--LFCGLDQDKG---PKMTKEEE 626

  Fly   559 LPVAEARRINQ-ETAQAQVKKMLDNATGV 586
                ||.::.. :|::..:.:.:.|..|:
Mouse   627 ----EAMKMKMTDTSEKPLWRTVVNINGI 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 126/550 (23%)
Slc5a1NP_062784.3 SLC5-6-like_sbd 27..665 CDD:294310 150/677 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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