DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and SLC5A12

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_848593.2 Gene:SLC5A12 / 159963 HGNCID:28750 Length:618 Species:Homo sapiens


Alignment Length:553 Identity:108/553 - (19%)
Similarity:199/553 - (35%) Gaps:124/553 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLFYLLILV---VGIWAGRKKQSGNDSEEEVMLAGRSIGLF-VGIFTMTATWVGGGYINGTAEAI 71
            |:|..|..:   :|::...|::. ..:..|.::.||.:... ||: ::||:::....:.||...:
Human    12 VVFAALFFISSGIGVFFAIKERK-KATSREFLVGGRQMSFGPVGL-SLTASFMSAVTVLGTPSEV 74

  Fly    72 YTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFLPALCGEVFWA 136
            |..|..:......|...::.....|.....:.|..:..:.||..|.:.:.....:..:...:.:.
Human    75 YRFGASFLVFFIAYLFVILLTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATVIYIVQTILYT 139

  Fly   137 AGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMCIPFAW 201
            ..::.|....|:.:...|...||..:..:..||...|||.:|.:||..|:..:.:|....:  ..
Human   140 GVVVYAPALALNQVTGFDLWGSVFATGIVCTFYCTLGGLKAVVWTDAFQMVVMIVGFLTVL--IQ 202

  Fly   202 SNEHVGS---------------LSDLEVD-------WIGHVEPKKHWLYIDYGLLLVFGGIPWQV 244
            .:.|.|.               :.|.:||       |...|.....||.| ||:.        |.
Human   203 GSTHAGGFHNVLEQSTNGSRLHIFDFDVDPLRRHTFWTITVGGTFTWLGI-YGVN--------QS 258

  Fly   245 YFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAI-----AKATPWNETDYKGPYPLTVDET 304
            ..||.:|.||...|:|..|....|..::.:..|..|.|     ....||.......|        
Human   259 TIQRCISCKTEKHAKLALYFNLLGLWIILVCAVFSGLIMYSHFKDCDPWTSGIISAP-------- 315

  Fly   305 SMILPMVLQYLTPDFVSFFGLGAVSAA-----VMSSADSSVLSAASMFARNVYKLIFRQKASEME 364
            ..::|..:..:   |.:..||..:..|     .:|:..||:.:.|::...:..|..|...:.::.
Human   316 DQLMPYFVMEI---FATMPGLPGLFVACAFSGTLSTVASSINALATVTFEDFVKSCFPHLSDKLS 377

  Fly   365 IIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYI 429
             .|:.:...::.|::.|.||:.                                    .|:...:
Human   378 -TWISKGLCLLFGVMCTSMAVA------------------------------------ASVMGGV 405

  Fly   430 VALAIRLSG--GEAILGLAPLIKYPGYDEETKEQMFPF-RTMAMLLSLVTLISVSWWTKM----- 486
            |..::.:.|  |..:|||..|    |.       :||| .....|..|:|.|::|:|..:     
Human   406 VQASLSIHGMCGGPMLGLFSL----GI-------VFPFVNWKGALGGLLTGITLSFWVAIGAFIY 459

  Fly   487 ---MFESGKLPPSYDYFRCVVNIPEDVQRVGDP 516
               ..::..||.|.|  :|   |..:|...|.|
Human   460 PAPASKTWPLPLSTD--QC---IKSNVTATGPP 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 97/508 (19%)
SLC5A12NP_848593.2 SLC5sbd_SMCT2 3..527 CDD:212089 108/553 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146509
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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