DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and Slc5a5

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_444478.2 Gene:Slc5a5 / 114479 MGIID:2149330 Length:618 Species:Mus musculus


Alignment Length:649 Identity:133/649 - (20%)
Similarity:236/649 - (36%) Gaps:173/649 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LFYLLILV---VGIWAGRKKQSGNDSEEEVMLAGRSIGLF-VGIFTMTATWVGGGYINGTAEAIY 72
            :|..::||   :|:|.|..: .|..|.::....||.:... ||: ::.|:::....:.|......
Mouse    19 VFATMLLVSTGIGLWVGLAR-GGQRSADDFFTGGRQLAAVPVGL-SLAASFMSAVQVLGVPAEAA 81

  Fly    73 TSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERM---GGLLFLPA---LCG 131
            ..||.:.....|..|:.:...:.|.....:.|..:....|:..|...:   |.|.:|.|   ..|
Mouse    82 RYGLKFLWMCVGQLLNSLLTALLFLPIFYRLGLTSTYQYLELRFSRAVRLCGTLQYLVATMLYTG 146

  Fly   132 EVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLW-- 194
            .|.:|..::      |:.:..:|...|::.:..|...||..||:.:|.:|||.|:..:.:|.|  
Mouse   147 IVIYAPALI------LNQVTGLDIWASLLSTGIICTLYTTVGGMKAVVWTDVFQVVVMLVGFWVI 205

  Fly   195 -----MCIPFAWS------NEHVGSLSDLEVDWIGHVEPKKHWLYIDYGLLLVFGGIPW------ 242
                 |.:...|:      |....:|.|.:.|      |:..:.:..:   :|.|.:.|      
Mouse   206 LARGVMLMGGPWNVLSLAQNHSRINLMDFDPD------PRSRYTFWTF---VVGGSLVWLSMYGV 261

  Fly   243 -QVYFQRVLSSKTAGRAQ---------LLSYVAAAGC--ILMAI-----PPVLIGAIAKATPWNE 290
             |...||.::..|..:|:         |...||:|.|  |:|.:     .|:|.|.||....:  
Mouse   262 NQAQVQRYVACHTERKAKLALLVNQLGLFLIVASAACCGIVMFVYYKDCDPLLTGRIAAPDQY-- 324

  Fly   291 TDYKGPYPLTVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVY--- 352
                  .||.|.:....||.|     |...    |....:..:|:|.:|:.:.|::...::.   
Mouse   325 ------MPLLVLDIFEDLPGV-----PGLF----LACAYSGTLSTASTSINAMAAVTVEDLIKPR 374

  Fly   353 -------KLIFRQKASEMEIIW---VMRVA----IIVVGILA---TIMALTIPSIYGLWSMCSDL 400
                   ||:|..|.  :..|:   .:.||    ::..|:|.   |:|.:....:.|.:::    
Mouse   375 MPSLAPRKLVFISKG--LSFIYGSTCLTVAALSSLLGGGVLQGSFTVMGVISGPLLGAFTL---- 433

  Fly   401 VYVILFPQLLMVVHFKKHCNTYGSLSAYIVALAIRL---------SGGEAILGLAP--------- 447
              .:|.|.          |||.|.||.....||:.|         ..||..:|:.|         
Mouse   434 --GMLLPA----------CNTPGVLSGLTAGLAVSLWVAVGATLYPPGEQTMGVLPTSAAGCTNA 486

  Fly   448 --LIKYPGYDEETKEQMFPFRTMAMLLSLVTLISVSWWTKMMFESGKLPPSYDYFRCVVNIPEDV 510
              |...||....::.  .|...|                    :||: |...|.|..|..:....
Mouse   487 SVLPSPPGAANTSRG--IPSSGM--------------------DSGR-PAFADTFYAVSYLYYGA 528

  Fly   511 QRVGDPSESGEQLSVMAGPLARS------------YGAATMAGKDERNGRINPALESDDDLPVA 562
            .........|..:|.:.||..||            ...|::|.|::.....:..::..:|:|.|
Mouse   529 LGTLTTMLCGALISYLTGPTKRSSLGPGLLWWDLARQTASVAPKEDTTTLEDSLVKGPEDIPAA 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 115/554 (21%)
Slc5a5NP_444478.2 SLC5sbd_NIS 15..549 CDD:271393 125/604 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 571..618 4/22 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836571
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.830

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