DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a12

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_017948838.2 Gene:slc5a12 / 100495641 XenbaseID:XB-GENE-954044 Length:643 Species:Xenopus tropicalis


Alignment Length:689 Identity:133/689 - (19%)
Similarity:239/689 - (34%) Gaps:183/689 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLFYLLILV---VGIWAG---RKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAE 69
            |:|..|.||   :|::..   |||.|..|    .::.|:.:.......::||:::....:.|...
 Frog    18 VVFAALFLVSAGIGVFFAIKERKKTSSAD----FLVGGKQMTCGPVALSLTASFMSAVTVLGAPA 78

  Fly    70 AIYTSGLVWCQAPFG-----YALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFLPAL 129
            .:|..|     |.||     ||..::|....|.....:.|..:..:.|:..|...:.....:..:
 Frog    79 EVYRFG-----ASFGIFFISYAFVVIFSAELFVPVFYRSGITSTYEYLELRFNRVVRYAATIMYI 138

  Fly   130 CGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLW 194
            ...:.:...::.|....|:.:...|...||:.:..:..||...|||.:|.:||..|:..:.:|..
 Frog   139 VQTILYTGVVVYAPALALNQVTGFDLWGSVVATGIVCTFYCTLGGLKAVVWTDAFQMVVMVVGFL 203

  Fly   195 MCI----------PFAWSNEHVGS---LSDLEVDWIGHVEPKKHWLYIDYGLLLVFGGIPW---- 242
            ..:          ...|.....||   :::.:||.:     |:|    .:..:.|.|...|    
 Frog   204 TVLIEGTIQNGGPSKIWETATNGSRVDIANFDVDPL-----KRH----TFWTIAVGGTFTWLGIY 259

  Fly   243 ---QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKA-----TPWNETDYKGPYPL 299
               |...||.:|.|:...|:|..|:...|..::.:..|..|.|..|     .||.......|   
 Frog   260 GVNQSTVQRCISCKSEKHAKLALYLNLLGLWIILVCSVFTGLIMYAHFVSCDPWTAGFITAP--- 321

  Fly   300 TVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASM----FARNVYKLIFRQKA 360
              |:......|.:....|.....| :....:..:|:..:|:.:.|::    |.:|::|.|..:|:
 Frog   322 --DQMMPYFVMNIFSKMPGLPGLF-VACAFSGTLSTVAASINALATVTFEDFVKNIFKNISDRKS 383

  Fly   361 SEMEIIWVMRVAIIVVGILATIMALTIP----------SIYGLWSMCSD-----LVYVILFPQLL 410
            :     |:.:...::.|||.|:||:...          ||:|   ||..     ....|:||   
 Frog   384 T-----WISKGLCVLFGILCTVMAVVASFMGGVVQAALSIHG---MCGGPMLGLFTLGIVFP--- 437

  Fly   411 MVVHFKKHCNTYGSLSAYIVALAIRLSGGEAILGLAPLIKYPGYDEETKEQMFPFRTMAMLL--- 472
                   ..|..|:|...::.:.:....|.......|.:        ||......||...:|   
 Frog   438 -------WSNWKGALGGLLIGIIMSFWVGIGGFVFPPPV--------TKTFPLELRTDGCILANM 487

  Fly   473 ------SLVTLISVSW--------------WTKMMF------------------------ESGK- 492
                  :|||.::.:.              |..:.:                        |.|| 
 Frog   488 TINGTETLVTTLATALDPTQAPARSVLADNWYSLSYLYYSAVGCLSCIISGLLISFVTGREHGKN 552

  Fly   493 -----LPPSYDYF---------RCVVNIPEDVQRVG-DPSESGEQLSVMAGPLARSYGAATMAGK 542
                 :.|..:.|         :|...:|.|.:... ||.::.:. .|...|:|.         |
 Frog   553 IRPLLIRPICNIFCFWSDKYKTKCWCGVPHDREEEDFDPKDNPDN-DVKMAPVAE---------K 607

  Fly   543 DERNGRINPALESDDDLPVA--EARRINQETAQAQVKKM 579
            ..:||..|   .|...||..  ||.:....|.:.::..|
 Frog   608 SSQNGYDN---NSCRKLPPGYNEAEKSYTNTNEEKISYM 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 108/533 (20%)
slc5a12XP_017948838.2 SLC5-6-like_sbd 9..546 CDD:382020 109/577 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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