DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and LOC100492076

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_002940185.1 Gene:LOC100492076 / 100492076 -ID:- Length:537 Species:Xenopus tropicalis


Alignment Length:516 Identity:242/516 - (46%)
Similarity:349/516 - (67%) Gaps:16/516 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 INIAGVVSIVLFYLLILVVGIWAG--RKKQSGNDSEEEV-MLAGRSIGLFVGIFTMTATWVGGGY 63
            :|:.|::::::||.:.||.|:||.  .||...|..:.|| ::.||::.:|||:||.|||||||.|
 Frog     3 LNVPGLIAVIVFYAMTLVTGLWAAWKAKKSEKNKKQTEVAIVGGRNLNIFVGLFTTTATWVGGAY 67

  Fly    64 INGTAEAIY--TSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFL 126
            ||||||.:|  :.||.|..||.|:|.:.:.|.:||..|||.:.|:||:||||::||..||.:|||
 Frog    68 INGTAEIVYLPSRGLAWVHAPLGFAATFIIGALFFVKPMRSKNYVTMMDPLQETFGNTMGSILFL 132

  Fly   127 PALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFI 191
            |.|.|:|||.|.|||:||||:|||:|:....|:|:|:|..|.|||.||||||||||||||..:.|
 Frog   133 PPLLGDVFWFASILASLGATVSVILDVKGYVSIIISACTVIIYTLLGGLYSVAYTDVIQLLFMII 197

  Fly   192 GLWMCIPFAWSNEHVGSLSDLEVD------WIGHVEPKKHWLYIDYGLLLVFGGIPWQVYFQRVL 250
            .||:|:|||..|....:::...|:      |||.::|.....::|....|..|||.||.||||||
 Frog   198 SLWICVPFALLNSASENIAYTAVNALYQAPWIGKIQPGYIARWLDDLAYLSLGGIAWQTYFQRVL 262

  Fly   251 SSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYPLTVDETSMILPMVLQYL 315
            ::.::.:|.:.||::...|.:|.:|.:||||:|.:|.||:|.|..|.|....|::||||:|||||
 Frog   263 AASSSKQAMVTSYLSGLLCAVMGVPSILIGAVAVSTDWNQTSYGLPTPYERRESNMILPLVLQYL 327

  Fly   316 TPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILA 380
            .|.:||..||||::||||||||||:|||:||||.|:||.:.|:||||.|::||||::::::|.:.
 Frog   328 CPTYVSVAGLGAIAAAVMSSADSSLLSASSMFAYNIYKRLLRKKASEREVLWVMRLSMVLLGSVG 392

  Fly   381 TIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYIVALAIRLSGGEAILGL 445
            |.:|....|:|.:|.:..:|||.||||||...: |....|||||.:.:|:...:||.|||:.|.:
 Frog   393 TGLAFLSNSVYDMWFLSGELVYAILFPQLCCAL-FIPGTNTYGSAAGFILGFVLRLLGGESALKI 456

  Fly   446 APLIKYPG--YDEETKEQMFPFRTMAMLLSLVTLISVSWWTKMMFESGKLPPSYDYFRCVV 504
            .|.:.|||  ..:....|.|||:|..|.:||:|::::|:..:.:|....||..:|.  |.|
 Frog   457 PPFLHYPGCILVDGVFIQQFPFKTFTMTVSLITIVAISYLAQFLFMKNILPAQWDI--CYV 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 233/486 (48%)
LOC100492076XP_002940185.1 SLC5sbd_CHT 8..494 CDD:271368 233/486 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004760
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.