DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and LOC100488353

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_002936886.2 Gene:LOC100488353 / 100488353 XenbaseID:XB-GENE-29079155 Length:606 Species:Xenopus tropicalis


Alignment Length:630 Identity:130/630 - (20%)
Similarity:244/630 - (38%) Gaps:129/630 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLFYLLIL---VVGIW---AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAE 69
            |:|..::|   |:||:   |||:|    ::.:|.:..|||:.......::||:::....:.||..
 Frog    16 VVFAAVLLISAVIGIYYAFAGRRK----NTSQEFLTGGRSMSALPVALSLTASFMSAVTVLGTPA 76

  Fly    70 AIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGE---RMGGLLFLPALCG 131
            .:|..|.::....|.|...::.....|.....:....:..:.|:..|.:   .:|.::|:..:  
 Frog    77 DVYRFGAIYSMFAFSYVFVVIICAEIFLPVFYRLNITSTYEYLELRFNKCVRILGTVIFIIEM-- 139

  Fly   132 EVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMC 196
             |.:...::.|....|:.:...:...::..:..:..||...||:.:|.:|||.|:..:..|....
 Frog   140 -VLYTGIVIYAPALALNQVSGFNLWGAMTATGLVCTFYCTLGGIKAVIWTDVFQIVIMVAGFIAV 203

  Fly   197 ----------IPFAWSNEHVGSLSDLEVDWIGHVEP-KKH--WLYIDYGLLLVFG--GIPWQVYF 246
                      |....::.:.|...:.   |....:| ::|  |..:..|..|..|  |:. |...
 Frog   204 IIRGVVVQGGIQTIINDSYYGGRLNF---WDFDPQPLRRHTFWTIVIGGTFLWVGIYGVN-QSQV 264

  Fly   247 QRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKAT-----PWNETDYKGPYPLTVDETSM 306
            ||.:|.||.|:|:|..|:...|.:::....||.|.|..:.     ||               ||.
 Frog   265 QRYISCKTKGQAKLSLYINLIGLMIILACAVLCGLILYSVYKDCDPW---------------TSQ 314

  Fly   307 IL---PMVLQYLTPDFVSFF----GLGAVSA--AVMSSADSSVLSAASMFARNVYKLIFRQKASE 362
            |:   ..::.||..|.:..:    ||....|  ..:|:..||:.:.|::...::.|..  ...||
 Frog   315 IISAPDQLMPYLVLDILQGYPGVPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPY--THLSE 377

  Fly   363 MEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVH---FKKHCNTYGS 424
            .::.|:.:....:.|||...|| .:.|..|.....:..::.::...||.:..   |...||:.|:
 Frog   378 NKLSWISKGMSALYGILCIAMA-AVASFMGSVIQAALSIFAMVGGPLLGLFSLGLFFPFCNSVGA 441

  Fly   425 LSAYIVALAIRLSGGEAILGLAPL--------IKYPGYDEETKE----QMFPFRTMAMLLSLVTL 477
            :...:...::.|..|.......||        :...|.:..|.:    .|....||||:.:|:.|
 Frog   442 IVGLLFGFSMSLWAGIGAQIYPPLPERSRPLPLSIAGCNFSTMDTNWTSMTTEPTMAMVTNLIPL 506

  Fly   478 ------ISVSWWTKMMFESGKLPPSYDYFRCVVNIPEDVQRVGDPSESGEQLSVMAGPLARSYGA 536
                  :...:|..:         ||.||..:..|...:        .|..:|:|:|.|.:|...
 Frog   507 DTSERPVLADYWYSL---------SYLYFSTLGTIVTIL--------VGVIVSLMSGGLKQSINH 554

  Fly   537 ATMAG---------------KDERN---------GRINPALESDD 557
            ..:.|               ||.::         |..||:...||
 Frog   555 DYLFGRQDFSCDIFSCRKSEKDAKDLWPKPNPYQGHENPSFVKDD 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 110/528 (21%)
LOC100488353XP_002936886.2 SLC5-6-like_sbd 10..550 CDD:444915 121/579 (21%)

Return to query results.
Submit another query.