DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and slc5a2

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_002940641.3 Gene:slc5a2 / 100380144 XenbaseID:XB-GENE-5961970 Length:617 Species:Xenopus tropicalis


Alignment Length:638 Identity:147/638 - (23%)
Similarity:233/638 - (36%) Gaps:193/638 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYI--- 64
            |.|.:..||.::::|:.||:|:.|:...|  :.....|||||:.......::.|:.:|.|:.   
 Frog    23 NPADISVIVGYFIIIIGVGLWSMRRANRG--TVGGYFLAGRSMSWGPVGASLFASNIGSGHFVGL 85

  Fly    65 --NGTAEAIYTSGLVWCQAPFGYALSLV-FGGIFFANPMRKQGYITMLDPLQDSF-GERMGGLLF 125
              .|.|..|..:|..|      .||.:| |.|..|.........:||.:.|:..| |:|:...|.
 Frog    86 AGTGAASGIAVAGFEW------NALFVVLFLGWIFVPVYLTAEVVTMPEYLKKRFGGQRIQMYLS 144

  Fly   126 LPALCGEVFWAAGILAALGAT-LSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCI 189
            ..:|...:|....:....||. :.|.:..:...|||....|...||:.|||.::.|||.:|.|.|
 Frog   145 ALSLVMYIFTKISVDMFSGAVFIQVALGWNIYLSVIALLVITTIYTVTGGLAALMYTDTVQTFVI 209

  Fly   190 FIGLWMCIPFAWSNEHVGSLSDLEVDW-------IGHVE-----PKKHWLYIDYGLLL---VFGG 239
            ..|  .|:...::...||....|...:       :|:|.     |:...|:     ||   :.|.
 Frog   210 IGG--ACVLSVYAFNEVGGYDALMEKYMTAVPTVLGNVSESCAVPRADSLH-----LLRDPISGD 267

  Fly   240 IPW------------------QVYFQRVLSSKTAGRAQLLSYVAAAGCIL---MAIPP----VLI 279
            :||                  ||..||.|::::....:|       ||:|   |.|.|    |:.
 Frog   268 LPWPALILGLTIVSTWYWCSDQVIVQRCLAARSITHVKL-------GCVLCGYMKILPMFLMVMP 325

  Fly   280 GAIAKATPWNETDYKGP-----------------YPLTVDETSMILPMVLQYLTPDFVSFFGLGA 327
            |.|::.....:.....|                 ||..|.|           |.|:.:....|..
 Frog   326 GMISRVLFTEDVACVEPSRCLAACGTKIGCSNIAYPKLVIE-----------LMPNGLRGLMLAV 379

  Fly   328 VSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYG 392
            :.||:|||..|...|:.::|..:|::.: |.:|.|.|::.|.||                     
 Frog   380 MLAALMSSLASIFNSSGTLFTMDVWRRM-RPRAEEKELLLVGRV--------------------- 422

  Fly   393 LWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYIVALAIRLSGG-EAILGLAPLIK---YPG 453
             |::|...:.:...|    ||...:.    |.|..||.::|..|:.. .|:..||..:|   .||
 Frog   423 -WTVCLVALSIAWIP----VVQAAQG----GQLFDYIQSVASFLAPPIAAVYFLALFVKRVNEPG 478

  Fly   454 YDEETKEQMFPFRTMAMLLSLVTLISVSWWTKMMFESG--KLPPS---------YDYFR------ 501
                    .|......:.|.|..::     .:.:|.||  ..|.|         |.||.      
 Frog   479 --------AFWGLVGGLFLGLCRMV-----PEFIFGSGSCSAPSSCPTIICGVHYLYFAIILFLC 530

  Fly   502 ----------CVVNIP------------------EDVQRVG--DPSESGEQLS 524
                      |...||                  |:::..|  ||....:|||
 Frog   531 SGAIVLIVSLCTPPIPEKKLHRLVYSLRHSQEPREEMEETGVSDPQTQEKQLS 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 127/542 (23%)
slc5a2XP_002940641.3 SLC5-6-like_sbd 25..617 CDD:382020 146/636 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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