DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a8

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_021331097.1 Gene:slc5a8 / 100329285 ZFINID:ZDB-GENE-141211-63 Length:609 Species:Danio rerio


Alignment Length:669 Identity:128/669 - (19%)
Similarity:229/669 - (34%) Gaps:191/669 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IAGVVSIVLFYLLILV---VGIW---AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGG 62
            :..|...|:|.:::.|   :|::   |.|.:.|..|    .::||||:.......::||:::...
Zfish     7 VFSVWDYVVFIMMLAVSTGIGVYYAFAARSQSSSAD----FLVAGRSLSAPPVALSLTASFMSAI 67

  Fly    63 YINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFLP 127
            .:.||...:|..|.::....|.||..:......|.....:.|..:..:.|.      .|.:::.|
Zfish    68 TVLGTPVEVYKYGAIFILICFAYAFMVALSSEIFLPVFYRLGVTSTYEVLY------TGLVIYAP 126

  Fly   128 ALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIG 192
            ||                .|:.:..:|...:||.:..:...|...|||.:|.:|||.|:..:..|
Zfish   127 AL----------------ALNQVTGVDLWGAVISTGVVCTLYCTLGGLKAVVWTDVFQVGIMLAG 175

  Fly   193 LWMC----------IPFAWSNEHVGSLSDLEVDWIGHVEP-KKHWLYIDYGLLLVFGGIPWQVYF 246
            |...          ||...|:...|...:|   |.....| ::|    .:..:.|.|...|..::
Zfish   176 LLAVIVQSVLLQGGIPRIISDSAHGGRINL---WDFDPNPLRRH----TFWSITVGGTFYWTSFY 233

  Fly   247 -------QRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIG-----AIAKATPW-----NETDYK 294
                   ||.:|.|:...|::..::......::....|..|     ......||     :..|..
Zfish   234 GINHAQVQRYISCKSLIHAKMALFINLVTLWVVTFCAVFCGLCLYSVYKNCDPWMAKKVSAQDQL 298

  Fly   295 GPYPLTVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQ- 358
            .||        ::|.::.::  |.....|...|.|...|...:|:|.|:.:..|......:.|. 
Zfish   299 MPY--------LVLDILSEF--PGLPGLFVAAAYSGTFMFIVNSTVSSSVNALAAVTVTDVLRPY 353

  Fly   359 -KASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTY 422
             ..||.::.|..:...:..|.:...||       |:.||..                        
Zfish   354 LSLSEKQLSWASKAMSLFYGAVCIGMA-------GIASMMG------------------------ 387

  Fly   423 GSLSAYIVALAIRLSG--GEAILGLAPLIKYPGYDEETKEQMFP-FRTMAMLLSLVTLISVSWWT 484
            |.|.|     |..:||  |..:|||..|           ..:|| ..:...|..||:.:.:|.|.
Zfish   388 GMLQA-----AFSISGVIGGPLLGLFSL-----------AILFPCANSKGGLAGLVSGLGLSLWV 436

  Fly   485 KMMFESGKLPPSYDYFRCVVNIPEDVQRVGDPSESGEQLSVMAGPLARSYGAATMAGKDERNGRI 549
                             |:     ..|....|:|:...|::      .::|.......|..|...
Zfish   437 -----------------CI-----GAQIYPPPAENSRPLTL------NTHGCNLSMAPDTTNWTA 473

  Fly   550 NPALESDDDLPVAEARRINQETAQAQVKKMLDN------------------ATGVKPS-GGGGGH 595
            :           .:..||.:||.:..:  :.||                  |.|:..| ..||..
Zfish   474 S-----------MDIYRIEEETLERPL--LADNWYSLSYLYFGLLGTVTAIAVGLIVSILSGGQR 525

  Fly   596 LQSQSGMAMPTAEQDNTAF 614
            ::.|.|:.:  :::|.|.:
Zfish   526 MKLQPGLTL--SKEDLTCY 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 103/512 (20%)
slc5a8XP_021331097.1 SLC5-6-like_sbd 6..527 CDD:320982 124/650 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580135
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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