DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and slc5a5

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001116937.1 Gene:slc5a5 / 100144711 XenbaseID:XB-GENE-486472 Length:600 Species:Xenopus tropicalis


Alignment Length:492 Identity:111/492 - (22%)
Similarity:192/492 - (39%) Gaps:98/492 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLF-VGIFTMTATWVGGGYINGTAEAIYT 73
            |.|||..           ...|..:.::....|||:... ||: :::|:::....:.|.....|.
 Frog    71 IGLFYAF-----------SHGGQKTSDDFFTGGRSMSAVPVGL-SLSASFMSAVQVLGVPAEAYR 123

  Fly    74 SGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERM---GGLLFLPALCGEVFW 135
            .|:.:.|...|..|:.|.....|.....:.|..:....|:..|...:   |.:.|   |.|.:|:
 Frog   124 YGVKFLQMCIGQILNSVMTAYIFMPIFYRLGITSTYQYLEMRFSRSVRLYGTIQF---LLGTMFY 185

  Fly   136 AAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMCIPFA 200
            ...::.|....|:.:..:|...|:..:..|..|||..||:.:|.:|||.|:|.:..|.:   ..|
 Frog   186 TGIVIYAPALILNQVTGLDIWASLFSTGAICTFYTTVGGMKAVIWTDVFQVFVMLSGFF---AVA 247

  Fly   201 WSNEH-VGSLSDLEVDWIGHV----------EPKKH---WLYI--DYGLLLVFGGIPWQVYFQRV 249
            ....| ||..|| .::..|:.          :|::.   |.::  ...|.|...|:. |...||.
 Frog   248 IRGIHLVGGFSD-AIEVAGNYSRINFGDFDPDPRRRYTFWTFVMGSTFLWLSMYGVN-QAQVQRY 310

  Fly   250 LSSKTAGRAQLLSYV-AAAGCILMA---------------IPPVLIGAIAKATPWNETDYKGPYP 298
            ::.||...|:|...| ..|.|::::               ..|:|.|.:      :..|...|| 
 Frog   311 VACKTENEAKLAILVNQVALCVIVSSAVTCGIVMFVYYLNCDPLLAGYV------SAPDQYMPY- 368

  Fly   299 LTVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEM 363
                   .:|.:..||  |.....| |....:..:|:|.:|:.:.|::...:    :.|.|... 
 Frog   369 -------FVLEIFDQY--PGIPGLF-LACAYSGTLSTASTSINAMAAVTVED----LIRPKYPN- 418

  Fly   364 EIIWVMRVAIIVVGI-LA------TIMALTIPSIYGLWSMCSDLVYVILFPQL--LMVVHFKKHC 419
              |...::.:|..|: ||      |:.||:.....|:......::.||..|.|  .|:..|...|
 Frog   419 --ISTKKLTLISKGLSLAYGCSCITVAALSSLLGGGVLQGSFTVMGVISGPLLGAFMLGMFFASC 481

  Fly   420 NTYGSLSAYIVALAIRL---SGG------EAILGLAP 447
            ||.|..:..:|.|.|.|   .||      ..::|:.|
 Frog   482 NTIGVFAGLLVGLVISLWVAVGGTIYPPSAEMMGVLP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 111/492 (23%)
slc5a5NP_001116937.1 SLC5sbd_NIS 56..587 CDD:271393 111/492 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.