DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a3a

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001153309.1 Gene:slc5a3a / 100004287 ZFINID:ZDB-GENE-090312-3 Length:671 Species:Danio rerio


Alignment Length:689 Identity:153/689 - (22%)
Similarity:250/689 - (36%) Gaps:200/689 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AGVVSIVLFYLLILVVG---IW-AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYIN 65
            |.::.:.::::|:|..|   :| |.|...||      ..|||||:..||...::..:.:|..:..
Zfish     8 ADIIVVAMYFVLVLCFGFFSMWRANRGTVSG------YFLAGRSMNWFVIGASLFVSNIGSEHFI 66

  Fly    66 GTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLF----- 125
            |.|.:...|||......|...|.|...|..|.......|..||.:.|...||.....:.|     
Zfish    67 GLAGSGAASGLAVGAWEFNAILLLQLLGWVFIPVYIHSGVYTMPEYLSKRFGGNRLKIYFASLTL 131

  Fly   126 ---------LPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYT 181
                     :....|.:|    |..:||..|.:        |:||...:....|:.|||.:|.||
Zfish   132 LLYIFTKLSVDLYSGALF----IQESLGWNLYL--------SIILLITLTALLTVTGGLVAVIYT 184

  Fly   182 DVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIG--------------------HVEPKKHW 226
            |.:|.|.:..|. :|: .|.|...||.|..|...::.                    ||.||.. 
Zfish   185 DTLQAFLMISGA-LCL-MAISLVKVGGLEGLRTKYMNALPNITFITLENNLTYSNSCHVNPKAD- 246

  Fly   227 LYIDYGLLL--VFGGIPW------------------QVYFQRVLSSKTAGRAQLLSYVAAAGCIL 271
               .:.||.  :...:||                  ||..||||:::....|:..:.:|.   :|
Zfish   247 ---SFKLLRSPLDKDLPWPAFLLGQTPASIWYWCADQVIVQRVLAARNIAHAKGSTLLAG---VL 305

  Fly   272 MAIPPVLI---GAIAKATPWNETDYKGP-----------------YPLTVDETSMILPMVLQYLT 316
            ..:|..:|   |.|::....:|....||                 ||..|   ..|:|:.|:.|.
Zfish   306 KVLPMFIIVIPGMISRVLFADELACIGPEHCMQVCNSRAGCTNTAYPRLV---MNIMPVGLRGLM 367

  Fly   317 PDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILAT 381
                    :..:.||:||..||...||:::|..::||:| |.:||..|::.|.|:.:::      
Zfish   368 --------MAVMLAALMSDLDSIFNSASTIFTLDIYKMI-RHQASSKELMVVGRLFVVL------ 417

  Fly   382 IMALTIPSIYGLWSMCSDLVYVIL----------FPQLLMVVHFKKHCNTYGSLSAYIVALAIRL 436
            |:|::|..:..:..|....:::.:          ...|.::....|.||..|:.....|.|    
Zfish   418 IVAISIAWVPFVIEMQGGQMFLYIQEVSDYLTPPIAALFLLGVLWKRCNETGAFWGGFVGL---- 478

  Fly   437 SGGEAILGLAPLI-----KYPGYDEETKEQMFPFRTMAMLLSLVTLISVSWWTKMMFESGKLPPS 496
                 |||:..||     :.|..|.......| .:.:..:.....|..||.:..::......|| 
Zfish   479 -----ILGIVRLILAFVYREPDCDSVDDRPAF-IKDVHFMYVAAVLFWVSGFVMVVVSLCTNPP- 536

  Fly   497 YDYFRCVVNIPEDVQRVGDPSESGEQLS--VMAGPLARSYGAATMAGKDERNGRINPALESDDDL 559
                                  |.||:|  .:.|...|:..|.|.|  ...||::...|:..:..
Zfish   537 ----------------------SKEQISKTTLWGLRNRNQPADTKA--KGGNGKLEQTLDGVEFQ 577

  Fly   560 PVAEARRINQETAQAQVKKMLDNATGVKPSGGGGGHLQS 598
            |:.              .:||.|           |||::
Zfish   578 PLP--------------PEMLPN-----------GHLEA 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 129/566 (23%)
slc5a3aNP_001153309.1 SLC5-6-like_sbd 9..671 CDD:294310 152/688 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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