DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7702 and Tpbg

DIOPT Version :9

Sequence 1:NP_650740.1 Gene:CG7702 / 42242 FlyBaseID:FBgn0038638 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_113995.2 Gene:Tpbg / 83684 RGDID:621453 Length:426 Species:Rattus norvegicus


Alignment Length:445 Identity:109/445 - (24%)
Similarity:170/445 - (38%) Gaps:126/445 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 SQAIASGAASEIVVSYSGNRIKLLQQLPA---------TNASLTLSCRHCGLQDLQAPLFMDVPN 131
            |.::.|.:.|......||:    .|..||         :.|:.|:.|.:..|.::.|.|   .|.
  Rat    35 SSSLPSSSTSPAAFLASGS----AQPPPAERCPAACECSEAARTVKCVNRNLLEVPADL---PPY 92

  Fly   132 VQALYISWNDITDDALVPDLFRGPFRNTRYEPIG-LRDLDLSHNRIVRLDRRLFEHTPHLTKLNL 195
            |:.|:::.|.:|   ::|   .|.|  .|..|:. |..|:||.|.:..:....|||.|.|.:|:|
  Rat    93 VRNLFLTGNQMT---VLP---AGAF--ARQPPLADLAVLNLSGNHLKEVGAGAFEHLPGLRRLDL 149

  Fly   196 AYNKLSSLDEATTA----SIGSVATLQRLDLSH-------------NGLMTLPAQLFSKLTSLRF 243
            ::|.|::|...|.|    |:.:.:.|..|.|:|             .|::.....:.:.|.|   
  Rat   150 SHNPLTNLSAFTFAGSNVSVSTPSPLLELILNHIVPPEDQRQNGSFEGMVAFEGMVAAALRS--- 211

  Fly   244 LDVSGNEFSTMPASLQLLGKSLVQLNLAGNAFLSLKENSLQGLVSLKRLNISSMPSLRSLEKGAL 308
                         .|.|.|  |..|.||.|.||.|..:.|.                        
  Rat   212 -------------GLALRG--LHHLELASNHFLYLPRDLLD------------------------ 237

  Fly   309 NLPALEHLDCSRNSKLERLELADLLSSRNLSQLDLSWNALTTLVINATGSSNNSSNSTNETWPRL 373
            .||:|:|||. ||:.|..|..|...:..:|..|.|..|||..|           .|||...|..|
  Rat   238 QLPSLKHLDL-RNNSLVSLTYASFRNLTHLESLHLEDNALKVL-----------HNSTLAEWQGL 290

  Fly   374 R--RMSISGNPWYCSCEL------FKALELIGLNHIDREWDGTEARCETPYLLAGSPLSNLTAER 430
            .  |:.:..|||.|.|.:      .|..|::.        |.....|..|..:....|.:||:..
  Rat   291 AHVRVFLDNNPWVCDCYMADMVSWLKETEVVP--------DKARLTCAFPEKMRNRGLLDLTSSD 347

  Fly   431 ICKMVIPKKYREVDEEPPRFLRRHYIILTAIIASIVLVIGLVIGFVVVCVRRRLK 485
            :          :.|...|:.|:..|:.|..::|    :||.:...|:...|:.:|
  Rat   348 L----------DCDATLPQSLQTSYVFLGIVLA----LIGAIFLLVLYLNRKGIK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7702NP_650740.1 leucine-rich repeat 110..131 CDD:275380 5/20 (25%)
LRR_RI <123..267 CDD:238064 41/161 (25%)
leucine-rich repeat 132..165 CDD:275380 9/32 (28%)
LRR_8 165..227 CDD:290566 22/79 (28%)
leucine-rich repeat 166..189 CDD:275380 8/22 (36%)
leucine-rich repeat 190..213 CDD:275380 9/26 (35%)
LRR_8 216..273 CDD:290566 14/69 (20%)
leucine-rich repeat 217..240 CDD:275380 6/35 (17%)
leucine-rich repeat 241..264 CDD:275380 3/22 (14%)
LRR_8 263..321 CDD:290566 15/57 (26%)
leucine-rich repeat 265..288 CDD:275380 9/22 (41%)
leucine-rich repeat 289..312 CDD:275380 1/22 (5%)
leucine-rich repeat 313..337 CDD:275380 9/23 (39%)
TpbgNP_113995.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54 5/22 (23%)
LRRNT 62..95 CDD:214470 8/35 (23%)
leucine-rich repeat 73..95 CDD:275380 7/24 (29%)
LRR_8 91..154 CDD:404697 23/70 (33%)
LRR 1 92..113 7/28 (25%)
leucine-rich repeat 96..119 CDD:275380 8/30 (27%)
LRR 2 116..139 6/22 (27%)
leucine-rich repeat 120..143 CDD:275380 8/22 (36%)
LRR 3 141..163 8/21 (38%)
leucine-rich repeat 144..174 CDD:275380 9/29 (31%)
LRR 4 172..210 5/37 (14%)
leucine-rich repeat 175..217 CDD:275380 9/57 (16%)
LRR 5 215..238 11/48 (23%)
LRR_8 216..276 CDD:404697 25/86 (29%)
leucine-rich repeat 218..241 CDD:275380 10/46 (22%)
LRR 6 239..261 11/22 (50%)
leucine-rich repeat 242..265 CDD:275380 9/23 (39%)
LRR 7 262..281 7/29 (24%)
leucine-rich repeat 266..289 CDD:275380 11/33 (33%)
LRRCT 300..351 CDD:214507 13/68 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337091
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24364
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.030

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