DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7702 and tpbgb

DIOPT Version :9

Sequence 1:NP_650740.1 Gene:CG7702 / 42242 FlyBaseID:FBgn0038638 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001239391.1 Gene:tpbgb / 792712 ZFINID:ZDB-GENE-091218-2 Length:382 Species:Danio rerio


Alignment Length:497 Identity:107/497 - (21%)
Similarity:167/497 - (33%) Gaps:181/497 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLFLAGAALLLATEVRSQHEDIPYQPVSNICQTCLCLSTQDVDHRTHFNLDCSVRNFEHILARW 70
            |||||..:...|:|        .|.|        |||.||.         ::|..:|...:....
Zfish    26 LLLFLTSSCSSLST--------CPAQ--------CLCESTV---------VNCESQNLTSVPQPL 65

  Fly    71 PEQFGSQAIASGAASEIVVSYSGNRIKLLQQLPATNASLTLSCRHCGLQDLQAPLFMDVPNVQAL 135
            ||..            ..::.:||||     |..:|||......|                :..|
Zfish    66 PENI------------TTLNLNGNRI-----LNLSNASFPRPLVH----------------LTHL 97

  Fly   136 YISWNDITD-DALVPDLFRGPFRNTRYEPIGLRDLDLSHNRIVRLDRRLFEHTPHLTKLNLAYNK 199
            |:|.|.:.: |::.       |:|..    .||.||||.|||:............:..||.:   
Zfish    98 YVSGNQLQELDSMA-------FQNFS----SLRLLDLSDNRILHFSIEALHQDNKIEVLNFS--- 148

  Fly   200 LSSLDEATTASIGSVATL--------QRLDLSHNGLMTLPAQLFSKLTSLRFLDVSGNEFSTMPA 256
             .||  ...:.||.:|.|        .|||||:|.|:.||..:|:.|:.|..||:..|...:. .
Zfish   149 -KSL--RNHSYIGVLARLFHHSLPKVSRLDLSNNDLVFLPEGIFTGLSELSLLDLRNNSLVSF-R 209

  Fly   257 SLQLLGKSLVQLNLAGNAFLSLKENSLQGLVSLKRLNISSMPSLRSLEKGALNLPALEHLDCSRN 321
            ::....|:|.:|:|..|||.:|...:|..|.|:..|                             
Zfish   210 NVTSQNKALKELDLRDNAFKALPNETLSELYSIPNL----------------------------- 245

  Fly   322 SKLERLELADLLSSRNLSQLDLSWNALTTLVINATGSSNNSSNSTNETWPRLRRMSISGNPWYCS 386
                                                                 |:.::||||.|.
Zfish   246 -----------------------------------------------------RVRLAGNPWRCD 257

  Fly   387 CELFKALELIGLNHIDREWDGTEARCETPYLLAGSPLSNLTAERI-CKMVIPKKYREVDEEPPRF 450
            |::  ...|..|...|...|.....|.:|..|....|.:|...:: |       :.:..:|..|.
Zfish   258 CDI--EYLLFWLEKQDFVTDRLNLTCASPRELKHVQLVHLEHSQLPC-------WSDNVDELNRV 313

  Fly   451 LRRHYIILTAIIASIVLVIGLVIGFVVVCVRRRLKGSDYGVQ 492
            |...|:.|..::|    :||::...|:...|:.:|...|.::
Zfish   314 LEPSYVFLGLVLA----LIGVIFLLVLYLNRKGIKRWMYNIR 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7702NP_650740.1 leucine-rich repeat 110..131 CDD:275380 1/20 (5%)
LRR_RI <123..267 CDD:238064 41/152 (27%)
leucine-rich repeat 132..165 CDD:275380 7/33 (21%)
LRR_8 165..227 CDD:290566 23/69 (33%)
leucine-rich repeat 166..189 CDD:275380 9/22 (41%)
leucine-rich repeat 190..213 CDD:275380 5/22 (23%)
LRR_8 216..273 CDD:290566 20/64 (31%)
leucine-rich repeat 217..240 CDD:275380 12/30 (40%)
leucine-rich repeat 241..264 CDD:275380 4/22 (18%)
LRR_8 263..321 CDD:290566 12/57 (21%)
leucine-rich repeat 265..288 CDD:275380 9/22 (41%)
leucine-rich repeat 289..312 CDD:275380 1/22 (5%)
leucine-rich repeat 313..337 CDD:275380 0/23 (0%)
tpbgbNP_001239391.1 LRRNT 41..70 CDD:214470 11/57 (19%)
leucine-rich repeat 49..68 CDD:275380 4/27 (15%)
LRR_8 68..128 CDD:290566 23/103 (22%)
leucine-rich repeat 69..93 CDD:275380 8/40 (20%)
LRR_RI <76..230 CDD:238064 55/192 (29%)
leucine-rich repeat 94..117 CDD:275380 7/33 (21%)
leucine-rich repeat 118..141 CDD:275380 9/22 (41%)
leucine-rich repeat 142..170 CDD:275380 8/33 (24%)
LRR_8 169..226 CDD:290566 19/57 (33%)
leucine-rich repeat 171..194 CDD:275380 11/22 (50%)
leucine-rich repeat 195..217 CDD:275380 4/22 (18%)
leucine-rich repeat 218..241 CDD:275380 9/22 (41%)
LRRCT 252..302 CDD:214507 14/51 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576236
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24364
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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