DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7702 and tpbg

DIOPT Version :9

Sequence 1:NP_650740.1 Gene:CG7702 / 42242 FlyBaseID:FBgn0038638 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_002938502.1 Gene:tpbg / 100379816 XenbaseID:XB-GENE-1016283 Length:404 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7702NP_650740.1 leucine-rich repeat 110..131 CDD:275380
LRR_RI <123..267 CDD:238064
leucine-rich repeat 132..165 CDD:275380
LRR_8 165..227 CDD:290566
leucine-rich repeat 166..189 CDD:275380
leucine-rich repeat 190..213 CDD:275380
LRR_8 216..273 CDD:290566
leucine-rich repeat 217..240 CDD:275380
leucine-rich repeat 241..264 CDD:275380
LRR_8 263..321 CDD:290566
leucine-rich repeat 265..288 CDD:275380
leucine-rich repeat 289..312 CDD:275380
leucine-rich repeat 313..337 CDD:275380
tpbgXP_002938502.1 LRR <74..>277 CDD:227223
leucine-rich repeat 90..112 CDD:275380
leucine-rich repeat 113..136 CDD:275380
leucine-rich repeat 137..160 CDD:275380
leucine-rich repeat 165..194 CDD:275380
LRR_8 194..253 CDD:338972
leucine-rich repeat 195..218 CDD:275380
leucine-rich repeat 219..242 CDD:275380
leucine-rich repeat 267..281 CDD:275378
LRRCT 277..328 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24364
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.