DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf73 and AT2G45700

DIOPT Version :10

Sequence 1:NP_650738.1 Gene:Cpsf73 / 42240 FlyBaseID:FBgn0261065 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_182094.1 Gene:AT2G45700 / 819178 AraportID:AT2G45700 Length:723 Species:Arabidopsis thaliana


Alignment Length:391 Identity:63/391 - (16%)
Similarity:136/391 - (34%) Gaps:149/391 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 FISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKISNISTEQMLYTEADLEASM 138
            |::||||||...    |.|:...|:.:.:..|           .|:.|:.          :....
plant   419 FLTHFHLDHYQG----LTKSFSHGKIYCSLVT-----------AKLVNMK----------IGIPW 458

  Fly   139 EKIETINFHEERDVMGVRFCAYIAGHVLGAAMFMIEIA-GIKILYTGDF--SRQEDRHLMAAEVP 200
            |:::.::..::.::.|:....:.|.|..|:.|.:.|.| |..:|:||||  |.:....|:.:.: 
plant   459 ERLQVLDLGQKVNISGIDVTCFDANHCPGSIMILFEPANGKAVLHTGDFRYSEEMSNWLIGSHI- 522

  Fly   201 PMKPDVLITESTYGTHIHE--KREDRENRFTSLVQKIVQ--------QGGRCLIPVFALGRAQ-- 253
                ..||.::||....::  |:|       :::|.:|:        .....||..:.:|:.:  
plant   523 ----SSLILDTTYCNPQYDFPKQE-------AVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLF 576

  Fly   254 -ELLLILDEFWSQNP--------------------------DLHEIPIYYASSLAKKCMAVYQTY 291
             |:..:|.|....||                          .:|.:|::..:|..:         
plant   577 LEVARVLREKIYINPAKLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLASFKR--------- 632

  Fly   292 INAMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTDPKN 356
                               .:|::|     .:.:....::..||....||.:::           
plant   633 -------------------LKHVAN-----RYTNRYSLIVAFSPTGWTSGKTKK----------- 662

  Fly   357 GVIIAGYCVEGTLAKAVLSEPEEITTLSGQKLPLNMSVDY-ISFSAHTDYQQTSEFIRLLKPTHV 420
                              ..|       |::|.....:.| :.:|.|:.:.:..||::.:.|..:
plant   663 ------------------KSP-------GRRLQQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVI 702

  Fly   421 V 421
            :
plant   703 I 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf73NP_650738.1 CPSF3-like_MBL-fold 18..211 CDD:293850 31/139 (22%)
YSH1 19..427 CDD:440849 63/391 (16%)
CPSF73-100_C 486..680 CDD:463330
AT2G45700NP_182094.1 SAM_1 244..300 CDD:425739
SNM1A-1C-like_MBL-fold 381..534 CDD:293831 33/144 (23%)
DRMBL 605..710 CDD:429512 18/168 (11%)
Blue background indicates that the domain is not in the aligned region.

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