DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf73 and Dclre1a

DIOPT Version :10

Sequence 1:NP_650738.1 Gene:Cpsf73 / 42240 FlyBaseID:FBgn0261065 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_006527280.1 Gene:Dclre1a / 55947 MGIID:1930042 Length:1047 Species:Mus musculus


Alignment Length:452 Identity:102/452 - (22%)
Similarity:167/452 - (36%) Gaps:122/452 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPYVDLIEADEID---LLFISHFHLDHCGA 85
            ||| ||.|:|...    |:|       || :|..    ||..:..||:   ..|::|||.||...
Mouse   700 GAG-EVRRTCPFY----KRI-------PG-TGFT----VDAFQYGEIEGCTAYFLTHFHSDHYAG 747

  Fly    86 LPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKISNISTEQMLYTEADLEASMEKIETINFHEER 150
            |          .:.|    |:.:|         .|.| |..:|  :..|....:.|..:....|.
Mouse   748 L----------SKDF----TRPVY---------CSEI-TGNLL--KKKLRVQEQYIRQLPMDTEC 786

  Fly   151 DVMGVRFCAYIAGHVLGAAMFMIEIA-GIKILYTGDFSRQEDRHLMAAEVPPMKPDVLITESTYG 214
            .|..|:.....|.|..||.|.:.::. |..||:||||  :.|..:..:.:...|...|..::||.
Mouse   787 VVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGDF--RADPSMERSRLAGRKVHTLFLDTTYC 849

  Fly   215 THIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQELLLILDEFWSQNPDLHEIPIYYASS 279
            :        .|..|.| .|:::|         ||:..|.|.:.:       ||....:...|...
Mouse   850 S--------PEYTFPS-QQEVIQ---------FAINTAFEAVTL-------NPRALVVCGTYCIG 889

  Fly   280 LAKKCMA---VYQTYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQ-- 339
            ..|..:|   |..:.:....::.:....:|.|.|...|:.        |:...::...| |||  
Mouse   890 KEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITT--------DMCDSLVHLLP-MMQIN 945

  Fly   340 -SGLSRELFESWCTDPKNGVIIAGYCVEGTLAKAVLSEPEEITTLSGQKLPLNMSVDYISFSAHT 403
             .||...|.:  | ..|...|:|......|.:..:.|..:.|....|     |:|:..|.:|.|:
Mouse   946 FKGLQSHLKK--C-GGKYDQILAFRPTGWTHSNNITSTADIIPQTRG-----NISIYGIPYSEHS 1002

  Fly   404 DYQQTSEFIRLLKPTHVVLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFR 465
            .|.:...|::.|||..::                       .:.::..:..|||  ::.||:
Mouse  1003 SYLEMKRFVQWLKPQKII-----------------------PTVNVGSFRSRNT--MEKYFK 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf73NP_650738.1 CPSF3-like_MBL-fold 18..211 CDD:293850 50/190 (26%)
YSH1 19..427 CDD:440849 97/412 (24%)
CPSF73-100_C 486..680 CDD:463330
Dclre1aXP_006527280.1 metallo-hydrolase-like_MBL-fold 696..851 CDD:451500 52/203 (26%)
DRMBL 921..1027 CDD:429512 29/145 (20%)
Blue background indicates that the domain is not in the aligned region.

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