DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpsf73 and CPSF2

DIOPT Version :10

Sequence 1:NP_650738.1 Gene:Cpsf73 / 42240 FlyBaseID:FBgn0261065 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_059133.1 Gene:CPSF2 / 53981 HGNCID:2325 Length:782 Species:Homo sapiens


Alignment Length:816 Identity:167/816 - (20%)
Similarity:304/816 - (37%) Gaps:251/816 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPYVDLIEA-----DEIDLLF 74
            :.::::..|...||....|.:|:....:.:||||.....|       :|:|::     .:||.:.
Human     2 TSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFS-------MDIIDSLRKHVHQIDAVL 59

  Fly    75 ISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYR---WMLSDYIKISNISTEQMLYTEADLEA 136
            :||....|.||||:.:.|...  .|.: :||..:|:   ..:.|..:..:.:.:..|:|..|::|
Human    60 LSHPDPLHLGALPYAVGKLGL--NCAI-YATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDA 121

  Fly   137 SMEKIETINFHEERDVM----GVRFCAYIAGHVLGAAMFMIEIAG-IKILYTGDFSRQEDRHLMA 196
            :.:||:.:.|.:..::.    |:......|||::|..::.|...| .:|:|..||:.:.:.||..
Human   122 AFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNG 186

  Fly   197 AEVPPM-KPDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQELLLILD 260
            ..:..: :|.:|||:|...|::..:|:.|:.:..:.|.:.::..|..||.|...||..||..:||
Human   187 CSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLD 251

  Fly   261 EFW-SQNPDLHEIPIYYASSLAKKCMAVYQTYINAMNDRIRR--QIAVNNPFVFRHISNLKGIDH 322
            :.| :::..|....:...::::...:...::.:..|:|::.|  :...||||.|||:|...|:..
Human   252 QIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSD 316

  Fly   323 FEDI-GPCVIMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKAVLSEPEEITT---- 382
            ...: .|.|::||...::.|.||:||..||.||||.:|:......||||:.::..|.|..|    
Human   317 LARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIEL 381

  Fly   383 -----LSGQKL------------------------------------------------------ 388
                 |.|::|                                                      
Human   382 RKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDESDIEEDIDQPSAHKTKHDLMMKGE 446

  Fly   389 ---------------------------------------------------------------PL 390
                                                                           |:
Human   447 GSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPM 511

  Fly   391 NMS--------------------VDYISFSAHTDYQQTSEFIRLLKPTHVVLVHGEQNEMSRLKL 435
            :..                    |.||.:...:|.....:.|..:||..:::|||.......|..
Human   512 DQDLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAE 576

  Fly   436 ALQREYEADASTDIKFYNPRNTHAVD-------------------LYFRGEKTAK---VMGSLAA 478
            ..:    |....|||.|.|:....||                   |.|...|.|:   :.|.|..
Human   577 CCR----AFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDM 637

  Fly   479 KNSEVGSKLSGVLVK--------RDFKYHLLAPSDLGKYTDMSMSVVTQRQSIP--WGSS----- 528
            :.|:|.   :||:::        .|.:..:.||||        .||:.|::::.  :|..     
Human   638 RVSKVD---TGVILEEGELKDDGEDSEMQVEAPSD--------SSVIAQQKAMKSLFGDDEKETG 691

  Fly   529 -----LSTLELLLDRIGAGCVEVLEAERKLRVFGCIELTVEQKIIVMEWQATHVNDVYADAVLAC 588
                 :.|||.|......|...|...|.:|..|        :::::.|    .:...:...||.|
Human   692 EESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDF--------KQVLLRE----GIQAEFVGGVLVC 744

  Fly   589 -----IMQSELGGTNLKGATKQTKSEDSRFRECLIE 619
                 :.::|.|...|:|...|   :..|.|:.|.|
Human   745 NNQVAVRRTETGRIGLEGCLCQ---DFYRIRDLLYE 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf73NP_650738.1 CPSF3-like_MBL-fold 18..211 CDD:293850 51/206 (25%)
YSH1 19..427 CDD:440849 117/571 (20%)
CPSF73-100_C 486..680 CDD:463330 33/159 (21%)
CPSF2NP_059133.1 CPSF2-like_MBL-fold 7..204 CDD:293851 52/206 (25%)
Beta-Casp 243..368 CDD:214983 38/124 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 407..449 0/41 (0%)
RMMBL 528..591 CDD:462191 16/66 (24%)
CPSF100_C 608..779 CDD:463836 41/196 (21%)

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