DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpsf73 and pot-2

DIOPT Version :10

Sequence 1:NP_650738.1 Gene:Cpsf73 / 42240 FlyBaseID:FBgn0261065 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_497017.1 Gene:pot-2 / 175110 WormBaseID:WBGene00010195 Length:251 Species:Caenorhabditis elegans


Alignment Length:83 Identity:23/83 - (27%)
Similarity:34/83 - (40%) Gaps:19/83 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 ASMEKIETINFHEERDVMGVRFCAYIA--GHVLGAAM------FMIEI-------AGIKILYTGD 185
            ||.|:.|...||..:|    .|..||.  ...:|.|:      .:|||       .|:|.|.:||
 Worm    58 ASAERRERRLFHVTQD----SFKRYIVPPNPRIGKAIEENGKELLIEIDVYDDHRDGLKNLNSGD 118

  Fly   186 FSRQEDRHLMAAEVPPMK 203
            |...::.|..:.....|:
 Worm   119 FVAIQNVHAASTRQTEMQ 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpsf73NP_650738.1 CPSF3-like_MBL-fold 18..211 CDD:293850 23/83 (28%)
YSH1 19..427 CDD:440849 23/83 (28%)
CPSF73-100_C 486..680 CDD:463330
pot-2NP_497017.1 POT1PC 19..174 CDD:435514 23/83 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.