Protein Alignment CstF64 and NAM8

DIOPT Version :10

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_011954.1
• Gene: NAM8 / 856486
• SGDID: S000001128
• Length: 523
• Species: Saccharomyces cerevisiae
• Alignment Length: 283
• Identity: 58/283 - (20%)
• Similarity: 108/283 - (38%)
• Gaps: 44/283 - (15%)

  Fly    17 SVFVGNIPYEATEEKLKEIF-SEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGY 80
            |:|||::....||.:|.|:| :........|:|.|:.:|..||:||.::.:.:....|:..:.|.
Yeast   164 SIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGV 228

  Fly    81 EIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDA-PELITKTVASLP--------- 135
            .:.||.::|.....:      ||.:.|....|........|:. ...::|..:.|.
Yeast   229 FLNGRAIKVGPTSGQ------QQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFK 287

  Fly   136 ----PEQMYELMKQMKLCIVSNPSEAR------QMLMLNPQL-AYALLQAMVVMRIVDPQQALGM 189
                .:.:|.:.:|..|...::|:...      ..|:...:| ||......:|...:...:..|.
Yeast   288 RNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGF 352

  Fly   190 LFKANQMP-----------PVLGGNPHQGPG---NHTMMGQQQVPQQQVQIPQQQQQAPQPPMP- 239
            :...:::.           |:.........|   ..|.:.||.:....:|:.|||....||...
Yeast   353 VQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSAKQTALLQQAMLSNSLQVQQQQPGLQQPNYGY 417

  Fly   240 VPGPGFPANVHP-NDIDLRMVPG 261
            :|.....|.|.| |::...|:||
Yeast   418 IPSSTCEAPVLPDNNVSSTMLPG 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM_CSTF2_CSTF2T	10..94	CDD:410072	22/77 (29%)
		CSTF2_hinge	111..190	CDD:433869	14/99 (14%)
		CSTF_C	377..416	CDD:464130
NAM8	NP_011954.1	RRM1_NGR1_NAM8_like	55..144	CDD:410023
		RRM2_SECp43_like	162..241	CDD:409781	22/76 (29%)
		RRM3_NGR1_NAM8_like	312..383	CDD:409782	7/70 (10%)