Sequence 1: | NP_477453.1 | Gene: | CstF64 / 42239 | FlyBaseID: | FBgn0027841 | Length: | 419 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011672.1 | Gene: | PTI1 / 853060 | SGDID: | S000003388 | Length: | 425 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 467 | Identity: | 95/467 - (20%) |
---|---|---|---|
Similarity: | 166/467 - (35%) | Gaps: | 142/467 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 VGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKG--FGFCEYKDQETALSAMRNLNGYEI 82
Fly 83 GGRTLRVDN-------ACTEKSRMEMQQLLQGPQ-----VENPY---------GEPCEPED---- 122
Fly 123 -------------------------------APELITKTVASLPPEQMYELMKQMKLCIVSN--- 153
Fly 154 --PSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGML-FKANQMPPVLGGNPHQGPGNHTMMG 215
Fly 216 QQQVPQQQVQIPQQQQQAPQPPMPVPGPGFPANVHPNDIDLRMVPGGPMPMDPRMMGRGMDQDLR 280
Fly 281 ASLPNPVPPPLMDPRARAQMPPQQQQGVPQAPPAPYPSDPRQRPM--DPRLRAGPGPQQQAPPQG 343
Fly 344 IPQAPPPTQQQQA--------AAQQLQSRLGAHGVLPSDASDQEKAALIMQVLQLSDEQIAQLPS 400
Fly 401 EQRVSIVMLKEQ 412 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CstF64 | NP_477453.1 | RRM | <13..>112 | CDD:223796 | 19/105 (18%) |
RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 16/80 (20%) | ||
CSTF2_hinge | 112..190 | CDD:291025 | 21/126 (17%) | ||
CSTF_C | 377..416 | CDD:291002 | 12/36 (33%) | ||
PTI1 | NP_011672.1 | RRM | 21..90 | CDD:214636 | 15/65 (23%) |
CSTF2_hinge | 185..255 | CDD:405077 | 18/71 (25%) | ||
PABP-1234 | <306..413 | CDD:130689 | 44/153 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45735 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |