Protein Alignment CstF64 and PTI1

DIOPT Version :10

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_011672.1
• Gene: PTI1 / 853060
• SGDID: S000003388
• Length: 425
• Species: Saccharomyces cerevisiae
• Alignment Length: 467
• Identity: 95/467 - (20%)
• Similarity: 166/467 - (35%)
• Gaps: 142/467 - (30%)

  Fly    20 VGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKG--FGFCEYKDQETALSAMRNLNGYEI 82
            :.|:|.|..::.:..:.:..|||:.:|...|..:||..|  |.:...||.:.|...:..:..:.:
Yeast    24 ITNLPPEWNQDIITSVVAGSGPVIDIKAKNDPRTGKLTGVLFDYLTSKDCKRAWEILNRIENFPV 88

  Fly    83 GGRTLRVDN-------ACTEKSRMEMQQLLQGPQ-----VENPY---------GEPCEPED---- 122
            ....:...|       ...:.|:.::.||.:...     :|.|:         ..|..|:.
Yeast    89 KIEQIIPPNYKDHLRETANKNSQKQVLQLNRDSYPFEAGLELPFEMVTEVPIPRRPPPPQAANNT 153

  Fly   123 -------------------------------APELITKTVASLPPEQMYELMKQMKLCIVSN--- 153
                                           ||:.|::.::.:||.|:.|::..:|  |:||
Yeast   154 NSVSNNTNIQFPDILSKASKHLPSFQDGSIIAPDKISQNLSKIPPLQLIEIISNLK--ILSNQEN 216

  Fly   154 --PSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGML-FKANQMPPVLGGNPHQGPGNHTMMG 215
              .|:....|..|..:..::.||::.|..:|......:| .:..:.|.:|..|..........:.
Yeast   217 IQKSQLESFLDTNSDITISVTQALLEMGFIDYSVVTKVLKSQVGEAPSLLSSNNTSNSNTPVSVI 281

  Fly   216 QQQVPQQQVQIPQQQQQAPQPPMPVPGPGFPANVHPNDIDLRMVPGGPMPMDPRMMGRGMDQDLR 280
            :...|   :.:|..:                .:.:||::.|.:..  ||||
Yeast   282 RNNTP---LHVPSNE----------------VSNNPNNMPLNVAM--PMPM-------------- 311

  Fly   281 ASLPNPVPPPLMDPRARAQMPPQQQQGVPQAPPAPYPSDPRQRPM--DPRLRAGPGPQQQAPPQG 343
             |.|..:|.||            |||....|||.|: ..|.|.|.  .|.|....|..||   |.
Yeast   312 -STPPFIPLPL------------QQQPFGFAPPGPF-MPPAQGPSMGQPVLANQLGQVQQ---QN 359

  Fly   344 IPQAPPPTQQQQA--------AAQQLQSRLGAHGVLPSDASDQEKAALIMQVLQLSDEQIAQLPS 400
            |.....|:...:|        |..||         ||.:..|     :|.|||.|:..||..|||
Yeast   360 ISSTEGPSNANKANDSGTINMAKLQL---------LPENQQD-----MIKQVLTLTPAQIQSLPS 410

  Fly   401 EQRVSIVMLKEQ 412
            :|::.:...:::
Yeast   411 DQQLMVENFRKE 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM_CSTF2_CSTF2T	10..94	CDD:410072	16/82 (20%)
		CSTF2_hinge	111..190	CDD:433869	22/127 (17%)
		CSTF_C	377..416	CDD:464130	12/36 (33%)
PTI1	NP_011672.1	RRM	21..90	CDD:214636	15/65 (23%)
		CSTF2_hinge	185..255	CDD:433869	18/71 (25%)
		PABP-1234	<306..413	CDD:130689	44/153 (29%)