Sequence 1: | NP_477453.1 | Gene: | CstF64 / 42239 | FlyBaseID: | FBgn0027841 | Length: | 419 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_009502.1 | Gene: | PIN4 / 852229 | SGDID: | S000000147 | Length: | 668 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 572 | Identity: | 97/572 - (16%) |
---|---|---|---|
Similarity: | 157/572 - (27%) | Gaps: | 268/572 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGYE 81
Fly 82 IGGRTLRVDN----ACTEKSRMEMQQ--------------------------------------- 103
Fly 104 --LLQGPQVENPYGEPCEPE----------------DAPELITKTVAS----------------- 133
Fly 134 ------------LPPEQM------------------------YELMKQMKLCIVSNPSEARQMLM 162
Fly 163 LNPQLAYALLQAMVVMRIVDPQ------------------QALGMLFKANQMPP-VLGG------ 202
Fly 203 -------------------------------NPHQGPGNHTMMGQQQVPQQQVQIPQQQQQAPQP 236
Fly 237 PMPVPGPGFPANVHPNDIDLRMVPGGPMPMDPRMMGRGMDQDLRASLPNPVPPPLMDPRARAQMP 301
Fly 302 -PQQQQGVPQAP-------------------PAPYPSDPRQ-RPMDPRLR---AGPGPQQQAP-- 340
Fly 341 PQGIPQAPPPTQQQ------------QAAAQQLQSRLGAHGVLPSDASDQEK 380 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CstF64 | NP_477453.1 | RRM | <13..>112 | CDD:223796 | 26/139 (19%) |
RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 21/77 (27%) | ||
CSTF2_hinge | 112..190 | CDD:291025 | 19/164 (12%) | ||
CSTF_C | 377..416 | CDD:291002 | 1/4 (25%) | ||
PIN4 | NP_009502.1 | RRM_PIN4_like | 84..162 | CDD:240699 | 21/75 (28%) |
R3H_RRM | 305..367 | CDD:100068 | 9/73 (12%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |