Protein Alignment CstF64 and PIN4

DIOPT Version :10

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_009502.1
• Gene: PIN4 / 852229
• SGDID: S000000147
• Length: 668
• Species: Saccharomyces cerevisiae
• Alignment Length: 572
• Identity: 97/572 - (16%)
• Similarity: 157/572 - (27%)
• Gaps: 268/572 - (46%)

  Fly    17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGYE 81
            ::.:.|||:...:|:|.:|..|:...|.....:..::|..:|..|..:...|.....:.:|||.|
Yeast    86 AIVIKNIPFAIKKEQLLDIIEEMDLPLPYAFNYHFDNGIFRGLAFANFTTPEETTQVITSLNGKE 150

  Fly    82 IGGRTLRVDN----ACTEKSRMEMQQ--------------------------------------- 103
            |.||.|:|:.    ...|:.|:|.::
Yeast   151 ISGRKLKVEYKKMLPQAERERIEREKREKRGQLEEQHRSSSNLSLDSLSKMSGSGNNNTSNNQLF 215

  Fly   104 --LLQGPQVENPYGEPCEPE----------------DAPELITKTVAS----------------- 133
              |:.|....:....|....                :.|.|..:..:|
Yeast   216 STLMNGINANSMMNSPMNNTINNNSSNNNNSGNIILNQPSLSAQHTSSSLYQTNVNNQAQMSTER 280

  Fly   134 ------------LPPEQM------------------------YELMKQMKLCIVSNPSEARQMLM 162
                        |||:|:                        |||...|.:       .|....:
Yeast   281 FYAPLPSTSTLPLPPQQLDFNDPDTLEIYSQLLLFKDREKYYYELAYPMGI-------SASHKRI 338

  Fly   163 LNPQLAYALLQAMVVMRIVDPQ------------------QALGMLFKANQMPP-VLGG------ 202
            :|...:|     :.::.:.||:                  |..|.:..|:.:.| ..||
Yeast   339 INVLCSY-----LGLVEVYDPRFIIIRRKILDHANLQSHLQQQGQMTSAHPLQPNSTGGSMNRSQ 398

  Fly   203 -------------------------------NPHQGPGNHTMMGQQQVPQQQVQIPQQQQQAPQP 236
                                           |.:.|.||:.::..... ....:|..|.|.:.||
Yeast   399 SYTSLLQAHAAAAANSISNQAVNNSSNSNTINSNNGNGNNVIINNNSA-SSTPKISSQGQFSMQP 462

  Fly   237 PMPVPGPGFPANVHPNDIDLRMVPGGPMPMDPRMMGRGMDQDLRASLPNPVPPPLMDPRARAQMP 301
            .:..|    ..|:|                             .:|..|....|        |.|
Yeast   463 TLTSP----KMNIH-----------------------------HSSQYNSADQP--------QQP 486

  Fly   302 -PQQQQGVPQAP-------------------PAPYPSDPRQ-RPMDPRLR---AGPGPQQQAP-- 340
             ||.||.|..|.                   |:.|.::..| ..::|.||   ..| |..|.|
Yeast   487 QPQTQQNVQSAAQQQQSFLRQQATLTPSSRIPSGYSANHYQINSVNPLLRNSQISP-PNSQIPIN 550

  Fly   341 PQGIPQAPPPTQQQ------------QAAAQQLQSRLGAHGVLPSDASDQEK 380
            .|.:.||.||.|.|            ..::|||.:..|     ||.|:.|.:
Yeast   551 SQTLSQAQPPAQSQTQQRVPVAYQNASLSSQQLYNLNG-----PSSANSQSQ 597

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM_CSTF2_CSTF2T	10..94	CDD:410072	21/80 (26%)
		CSTF2_hinge	111..190	CDD:433869	19/165 (12%)
		CSTF_C	377..416	CDD:464130	1/4 (25%)
PIN4	NP_009502.1	RRM_PIN4_like	84..162	CDD:240699	21/75 (28%)
		R3H_RRM	305..367	CDD:100068	9/73 (12%)