DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CstF64 and NOP6

DIOPT Version :9

Sequence 1:NP_477453.1 Gene:CstF64 / 42239 FlyBaseID:FBgn0027841 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_010068.1 Gene:NOP6 / 851313 SGDID:S000002372 Length:225 Species:Saccharomyces cerevisiae


Alignment Length:61 Identity:16/61 - (26%)
Similarity:27/61 - (44%) Gaps:7/61 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLN 78
            ||||::|.:.|..:|:..|....|. .::|..|      ||..|.|:...:......|.::
Yeast    80 VFVGSLPRDITAVELQNHFKNSSPD-QIRLRAD------KGIAFLEFDADKDRTGIQRRMD 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF64NP_477453.1 RRM <13..>112 CDD:223796 16/61 (26%)
RRM_CSTF2_CSTF2T 18..92 CDD:241115 16/61 (26%)
CSTF2_hinge 112..190 CDD:291025
CSTF_C 377..416 CDD:291002
NOP6NP_010068.1 NARP1 <1..55 CDD:403685
RRM_Nop6 78..151 CDD:409834 16/61 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0724
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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