Protein Alignment CstF64 and AT1G76460

DIOPT Version :10

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_565132.2
• Gene: AT1G76460 / 843979
• AraportID: AT1G76460
• Length: 285
• Species: Arabidopsis thaliana
• Alignment Length: 270
• Identity: 65/270 - (24%)
• Similarity: 105/270 - (38%)
• Gaps: 56/270 - (20%)

  Fly    12 DKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
            |.:...||||.:.:|...|.|::.|.:.|.:|...::.|:.:|:.||:||..::|.|.|..|..:
plant    20 DTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRACAD 84

  Fly    77 LNGYEIGGRTLRVDNACTEKSRMEMQQL------------------LQGPQ---VEN-PYGEPCE 119
            .... |.||....:.|...:.|..:...                  :|||:   :.| ||.:|.
plant    85 PTPI-IDGRRANCNLASLGRPRPPLPYAVIPNMPGRLRPASPYIGNVQGPRGSLIGNYPYQQPL- 147

  Fly   120 PEDAPELITKT--VASLPPEQMYELMKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVD 182
            |.:..:.:...  |.:..||.||                ::...:.:|.:....||...|...|:
plant   148 PYNYQQGVVYPYGVTAYGPEYMY----------------SQSQGLYSPYMGQQYLQVYGVPGAVN 196

  Fly   183 -PQQALGMLFKANQMPPVLGGNPHQG---PGNHTM-MGQQQVPQQQVQIPQQQQQAPQPPMP--V 240
             |....|.|  :..:|...|....||   ||:|.: :|...|.    .:......|.|.|.|  :
plant   197 SPVYQYGQL--SQTIPNGHGYTAVQGYSVPGSHILQLGGPTVS----TMTTSSMPALQAPYPSGI 255

  Fly   241 PGPGFPANVH 250
            |||. |...|
plant   256 PGPA-PVQSH 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM_CSTF2_CSTF2T	10..94	CDD:410072	25/81 (31%)
		CSTF2_hinge	111..190	CDD:433869	17/82 (21%)
		CSTF_C	377..416	CDD:464130
AT1G76460	NP_565132.2	RRM_RBM24_RBM38_like	24..99	CDD:409818	23/75 (31%)
		PABP-1234	<37..245	CDD:130689	50/231 (22%)