DRSC/TRiP Functional Genomics Resources

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Protein Alignment CstF64 and ESP1

DIOPT Version :10

Sequence 1:NP_477453.1 Gene:CstF64 / 42239 FlyBaseID:FBgn0027841 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_177525.2 Gene:ESP1 / 843720 AraportID:AT1G73840 Length:388 Species:Arabidopsis thaliana


Alignment Length:418 Identity:103/418 - (24%)
Similarity:145/418 - (34%) Gaps:145/418 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LQGPQVENPYGEPCEPEDAPELITKTVASLPPEQMYELMKQMKLCIVSNPSEARQMLMLNPQLAY 169
            :.|.|:....|.|.           .:|.:...|:|::|.|||..|..|..:||::|:.||.|..
plant     1 MAGKQIGGDGGLPA-----------NLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTK 54

  Fly   170 ALLQAMVVMRIVDP--------QQALGMLFKANQ-MPPVL-----------GGNPHQGPGNHTMM 214
            ||.||.:::.:|.|        .||:....:::| :||..           ||:.|: |.| || 
plant    55 ALFQAQIMLGMVQPPQVTPKVEPQAVQQPQQSHQSIPPKPNVQAHMSSFQGGGSVHE-PAN-TM- 116

  Fly   215 GQQQVPQQQVQIPQQQQQAPQP-PMPVPGPGFPANVHPNDIDLRMVPGGPMPMDPRMMGR----- 273
                    |.|.|.::...||| |||.|.|...||         .....|....|:..|.     
plant   117 --------QPQAPIRKHPTPQPMPMPPPPPSVSAN---------SAQSQPRFSHPQRQGHLNPAV 164

  Fly   274 -GMDQDLRASLPNPVPPPLMDPRARAQMPP--------------------------QQQQGVP-- 309
             .|.....:.:.|..||....|  .:|.||                          .|||..|  
plant   165 TSMSHPQSSQVQNAPPPASHHP--TSQQPPFHHLDIPASSTQLQQQPMHSGGGPHVAQQQSRPYH 227

  Fly   310 ----QAPPAP-----YPSDPRQRPMDPRLRAGPGPQQQAPPQGIPQAPP-----PTQQ------- 353
                ||...|     :...|.|....|...:|..|.....|| .||..|     ||.|       
plant   228 HQYGQAQTGPNTGFQHHGAPTQHLSQPMYHSGNRPPASGGPQ-FPQGQPHLPSQPTYQGGGQYRG 291

  Fly   354 ----QQAAAQQLQ----------------------------SRLGAHG---VLPSDASDQEKAAL 383
                .|.|....|                            |::|..|   ..|:..|.:.:.||
plant   292 DYNNNQLAGLMAQDRGPSWMAGQSESSNITHLPGLGPVPPPSQVGPGGGPPPRPAPISAEMEKAL 356

  Fly   384 IMQVLQLSDEQIAQLPSEQRVSIVMLKE 411
            :.||:.|:.|||..||.|||..::.|::
plant   357 LQQVMSLTPEQINLLPPEQRNQVLQLQQ 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF64NP_477453.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072
CSTF2_hinge 111..190 CDD:433869 25/86 (29%)
CSTF_C 377..416 CDD:464130 14/35 (40%)
ESP1NP_177525.2 CSTF2_hinge <15..72 CDD:433869 21/56 (38%)
PAT1 71..>269 CDD:401645 48/219 (22%)
CSTF_C 355..388 CDD:464130 14/30 (47%)
Blue background indicates that the domain is not in the aligned region.

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