Protein Alignment CstF64 and AT2G22100

DIOPT Version :10

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_565526.1
• Gene: AT2G22100 / 816745
• AraportID: AT2G22100
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 295
• Identity: 63/295 - (21%)
• Similarity: 101/295 - (34%)
• Gaps: 114/295 - (38%)

  Fly     7 EQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETAL 71
            |.:..|.|.|::||..:.::.|.|.||..|...|.:....:|.|:::|:.|||||..:|.::.|.
plant   154 ESADRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGAR 218

  Fly    72 SAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELITKTVASLP- 135
            :|::|                                           ||  ..:..:||:.||
plant   219 AALKN-------------------------------------------PE--KRMYNRTVSCLPA 238

  Fly   136 -------PEQMYELMKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKA 193
                   |.:..:.::.:|:.: |:.....:|.:....|.:.|.:.        .||...|...|
plant   239 RPFNSGKPREQQQPVESVKIDL-SHTGNQSEMALPGIDLGHGLDKG--------HQQQQNMSMYA 294

  Fly   194 NQMPPVLGGNPHQGPGNHTMMGQQQVPQQQVQIPQQQQQAPQPPMPVPGPGFPANVHPNDIDLRM 258
            .|..|..|         |:                      |||     |||      |.:...|
plant   295 GQNMPFYG---------HS----------------------QPP-----PGF------NPMYGAM 317

  Fly   259 VPGGPMP---MDPRMMGRGMDQDLRASLPNPVPPP 290
            : |.||.   .:.||.|.||...      .|:.||
plant   318 M-GNPMVAGLQNYRMFGSGMMNQ------GPMMPP 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM_CSTF2_CSTF2T	10..94	CDD:410072	23/83 (28%)
		CSTF2_hinge	111..190	CDD:433869	14/86 (16%)
		CSTF_C	377..416	CDD:464130
AT2G22100	NP_565526.1	PABP-1234	<164..>353	CDD:130689	59/285 (21%)
		RRM_SF	165..235	CDD:473069	24/114 (21%)