DRSC/TRiP Functional Genomics Resources

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Protein Alignment CstF64 and Rbm31y

DIOPT Version :10

Sequence 1:NP_477453.1 Gene:CstF64 / 42239 FlyBaseID:FBgn0027841 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_083246.1 Gene:Rbm31y / 74484 MGIID:1921734 Length:565 Species:Mus musculus


Alignment Length:106 Identity:23/106 - (21%)
Similarity:51/106 - (48%) Gaps:7/106 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKD 66
            |.|.|:.:      ..:|:|.:..|.:::.|.|..|:.|.::...:..|..:|..:||||..:||
Mouse    25 ATKNQQDA------SKMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVLFKD 83

  Fly    67 QETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQG 107
            ..|....:: :..:::.|:.:....|...:|:...:::..|
Mouse    84 SATVEKVLQ-VKDHKVDGKKIEFKRAKALESQFPNKKIFVG 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF64NP_477453.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072 18/83 (22%)
CSTF2_hinge 111..190 CDD:433869
CSTF_C 377..416 CDD:464130
Rbm31yNP_083246.1 RRM_SF 34..109 CDD:473069 17/75 (23%)
RRM_SF 119..193 CDD:473069 1/5 (20%)
Blue background indicates that the domain is not in the aligned region.

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