Sequence 1: | NP_477453.1 | Gene: | CstF64 / 42239 | FlyBaseID: | FBgn0027841 | Length: | 419 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097953.2 | Gene: | CG34354 / 5740528 | FlyBaseID: | FBgn0085383 | Length: | 550 | Species: | Drosophila melanogaster |
Alignment Length: | 456 | Identity: | 100/456 - (21%) |
---|---|---|---|
Similarity: | 152/456 - (33%) | Gaps: | 98/456 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 QEQSIMDKSMR----SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEY-- 64
Fly 65 -KDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDA----- 123
Fly 124 -----------PELITKTVASLPPEQMYELMKQMKLCIV--SNPSEARQMLML--NPQLAYALLQ 173
Fly 174 AMVVMRIVDPQQALGMLFKANQMPPVLGGNPHQG-PGNHTMMGQQQVPQQQVQIPQQQQQAPQPP 237
Fly 238 MPVPGPGFPANVHPNDIDLRMVPGGPMPMDPRMMGRGMD---------------QDLRASLP--- 284
Fly 285 NPVPPPLMDPRARAQMPPQQQQGVPQAPP-----APYPSDPRQRPMDPRLRAGPGPQQQAP---- 340
Fly 341 --PQGIPQAPPPTQQQQAAAQQLQSRL-GAHGVLPSDASDQEKAALIMQVLQLSDEQIAQLPSEQ 402
Fly 403 R 403 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CstF64 | NP_477453.1 | RRM | <13..>112 | CDD:223796 | 29/105 (28%) |
RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 25/76 (33%) | ||
CSTF2_hinge | 112..190 | CDD:291025 | 12/97 (12%) | ||
CSTF_C | 377..416 | CDD:291002 | 7/27 (26%) | ||
CG34354 | NP_001097953.2 | RRM2_TIA1_like | 97..171 | CDD:240799 | 25/77 (32%) |
RRM3_TIA1_like | 202..278 | CDD:240800 | 9/75 (12%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |