Protein Alignment CstF64 and rump

DIOPT Version :9

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_649899.1
• Gene: rump / 41138
• FlyBaseID: FBgn0267790
• Length: 632
• Species: Drosophila melanogaster
• Alignment Length: 86
• Identity: 34/86 - (39%)
• Similarity: 53/86 - (61%)
• Gaps: 3/86 - (3%)

  Fly     5 AQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSE-VGPVLSLKLVFDRESGKPKGFGFCEYKDQE 68
            |:::|...::.| |::.||||:...:.||::|.. ||.:..::|.|| ||||.:|.|..|:||.|
  Fly    47 ARDRSRERRNCR-VYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFD-ESGKARGCGIVEFKDPE 109

  Fly    69 TALSAMRNLNGYEIGGRTLRV 89
            ....|:..:|.||:.||.|.|
  Fly   110 NVQKALEKMNRYEVNGRELVV 130

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM	<13..>112	CDD:223796	32/78 (41%)
		RRM_CSTF2_CSTF2T	18..92	CDD:241115	31/73 (42%)
		CSTF2_hinge	112..190	CDD:291025
		CSTF_C	377..416	CDD:291002
rump	NP_649899.1	PABP-1234	48..435	CDD:130689	33/85 (39%)
		RRM1_hnRNPM_like	58..133	CDD:240831	32/75 (43%)
		RRM2_hnRNPM_like	234..307	CDD:240832
		RRM	<543..>631	CDD:223796
		RRM_SF	565..630	CDD:302621

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900