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Protein Alignment CstF64 and srsf1a
DIOPT Version :9
Sequence 1: | NP_477453.1 |
Gene: | CstF64 / 42239 |
FlyBaseID: | FBgn0027841 |
Length: | 419 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005157471.1 |
Gene: | srsf1a / 406288 |
ZFINID: | ZDB-GENE-040426-1950 |
Length: | 257 |
Species: | Danio rerio |
Alignment Length: | 73 |
Identity: | 22/73 - (30%) |
Similarity: | 41/73 - (56%) |
Gaps: | 3/73 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGYEI 82
::|||:|.:...:.::::|.:.|.:..:.|. :|..|.| |.|.|::|...|..|:...:||:.
Zfish 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLK-NRRGGPP--FAFVEFEDPRDAEDAVYARDGYDY 78
Fly 83 GGRTLRVD 90
.|..|||:
Zfish 79 DGYRLRVE 86
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0724 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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