| Sequence 1: | NP_477453.1 | Gene: | CstF64 / 42239 | FlyBaseID: | FBgn0027841 | Length: | 419 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005156854.1 | Gene: | tial1 / 394107 | ZFINID: | ZDB-GENE-040426-1547 | Length: | 399 | Species: | Danio rerio |
| Alignment Length: | 305 | Identity: | 65/305 - (21%) |
|---|---|---|---|
| Similarity: | 104/305 - (34%) | Gaps: | 118/305 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEY-------------KDQET 69
Fly 70 ALSAMRNLNGYEIGGRTLRVDNACTEK------------SRMEMQQLLQGPQVEN---------- 112
Fly 113 ------------PYGEPCEPEDAPELITKTVASLPPEQMYELMKQMKLCIVSNPSEARQMLMLN- 164
Fly 165 ----------------PQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVLGGNPHQGPGNHTM 213
Fly 214 MGQQQVP----------QQQVQIPQQQQQA------PQPPMPVPG 242 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CstF64 | NP_477453.1 | RRM | <13..>112 | CDD:223796 | 28/118 (24%) |
| RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 25/86 (29%) | ||
| CSTF2_hinge | 112..190 | CDD:291025 | 16/116 (14%) | ||
| CSTF_C | 377..416 | CDD:291002 | |||
| tial1 | XP_005156854.1 | RRM | 7..295 | CDD:223796 | 39/198 (20%) |
| RRM_SF | 9..108 | CDD:302621 | |||
| RRM2_TIAR | 114..203 | CDD:241061 | 26/89 (29%) | ||
| RRM3_TIAR | 233..305 | CDD:241064 | 10/88 (11%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||