Protein Alignment CstF64 and Rbm38

DIOPT Version :10

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: XP_063140362.1
• Gene: Rbm38 / 366262
• RGDID: 1308503
• Length: 266
• Species: Rattus norvegicus
• Alignment Length: 365
• Identity: 82/365 - (22%)
• Similarity: 109/365 - (29%)
• Gaps: 125/365 - (34%)

  Fly     2 ADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKD 66
            |..|...|..|.:...:|||.:||..|:..|::.|...|.:....::.||::||.:|:||    .
  Rat    18 APSAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGF----G 78

  Fly    67 QETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEP---EDAPELIT 128
            ...||...:|||.                                   |..|.|   ||
  Rat    79 IVAALEGTQNLNS-----------------------------------GRSCSPGGRED------ 102

  Fly   129 KTVASLPPEQMYELMKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKA 193
                |.|...|.:.....:.|...||                         |:|.:       ||
  Rat   103 ----SAPRVTMADRAAADRACKDPNP-------------------------IIDGR-------KA 131

  Fly   194 NQMPPVLGGNPHQGPGNHTMMGQQQVPQQQVQIPQQQQQAPQPPMPVPGPGFPANVHPNDIDLRM 258
            |.....||..|........ :|.||:....:    |:.....|....|    ||.|.|:.:
  Rat   132 NVNLAYLGAKPRSLQTGFA-VGVQQLHPTLI----QRTYGLTPHYIYP----PAIVQPSVV---- 183

  Fly   259 VPGGPMPMDPRMMGRGMDQDLRASLPNPVPPPLMDPRARAQMPPQQQQGVP-QAPPAPYPSDPRQ 322
            :|..|:|                ||.:|.........|.||.||......| .|.||...|
  Rat   184 IPATPVP----------------SLSSPYLEYTPASPAYAQYPPATYDQYPYAASPATATS---- 228

  Fly   323 RPMDPRLRAGPGPQQQAPPQGIPQAPPPTQQQQAAAQQLQ 362
                   ..|.|.....||.....||..|...|..|.|||
  Rat   229 -------FVGYGYPAAIPPALSATAPAGTTFVQYQAPQLQ 261

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM_CSTF2_CSTF2T	10..94	CDD:410072	22/83 (27%)
		CSTF2_hinge	111..190	CDD:433869	13/81 (16%)
		CSTF_C	377..416	CDD:464130
Rbm38	XP_063140362.1	None