Sequence 1: | NP_477453.1 | Gene: | CstF64 / 42239 | FlyBaseID: | FBgn0027841 | Length: | 419 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013211.1 | Gene: | Tial1 / 361655 | RGDID: | 1595845 | Length: | 392 | Species: | Rattus norvegicus |
Alignment Length: | 353 | Identity: | 78/353 - (22%) |
---|---|---|---|
Similarity: | 125/353 - (35%) | Gaps: | 105/353 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGYEI 82
Fly 83 GGRTLRVDNACTE----KSRMEMQ-QLLQGPQVENPYGEPCEPEDAPELITKTVASLPPEQMYEL 142
Fly 143 MKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVLGGNPHQG 207
Fly 208 PGNHTMMGQQQVPQ----QQVQIPQQQQQAPQPPMPVPGPGFPANVHPNDIDLRMVPGGPMPMDP 268
Fly 269 RMMGRGMDQDLRASLPNPVPPPLMDPRARAQMPP---------QQQQGVPQAPPAPYPSDPRQRP 324
Fly 325 MDPRLRAGPGPQQQAPPQGIPQAPPPTQ 352 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CstF64 | NP_477453.1 | RRM | <13..>112 | CDD:223796 | 31/98 (32%) |
RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 25/73 (34%) | ||
CSTF2_hinge | 112..190 | CDD:291025 | 11/77 (14%) | ||
CSTF_C | 377..416 | CDD:291002 | |||
Tial1 | NP_001013211.1 | RRM1_TIAR | 10..107 | CDD:410028 | |
RRM2_TIAR | 113..192 | CDD:410029 | 26/75 (35%) | ||
RRM3_TIAR | 222..294 | CDD:241064 | 13/89 (15%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |