Protein Alignment CstF64 and Snrnp35

DIOPT Version :9

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_001014149.1
• Gene: Snrnp35 / 360803
• RGDID: 1310724
• Length: 244
• Species: Rattus norvegicus
• Alignment Length: 107
• Identity: 33/107 - (30%)
• Similarity: 55/107 - (51%)
• Gaps: 8/107 - (7%)

  Fly     1 MADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYK 65
            :|.....:.:....:.::||..:..:..||||||:||..|.:..|:||.|..:|..||:.|.|||
  Rat    36 LARYVPNKGVTGDPLLTLFVARLNSQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYK 100

  Fly    66 DQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQG 107
            ::...|.|.|:.:|..|....:.||        .|:::.|:|
  Rat   101 EERALLKAYRDADGLVIDQHEIFVD--------YELERTLRG 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM	<13..>112	CDD:223796	32/95 (34%)
		RRM_CSTF2_CSTF2T	18..92	CDD:241115	29/73 (40%)
		CSTF2_hinge	112..190	CDD:291025
		CSTF_C	377..416	CDD:291002
Snrnp35	NP_001014149.1	RRM	<41..>126	CDD:223796	29/92 (32%)
		RRM_snRNP35	48..137	CDD:240683	32/95 (34%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	146..244

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810