Sequence 1: | NP_477453.1 | Gene: | CstF64 / 42239 | FlyBaseID: | FBgn0027841 | Length: | 419 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101056.1 | Gene: | Cstf2t / 309338 | RGDID: | 1310026 | Length: | 629 | Species: | Rattus norvegicus |
Alignment Length: | 639 | Identity: | 243/639 - (38%) |
---|---|---|---|
Similarity: | 302/639 - (47%) | Gaps: | 235/639 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYK 65
Fly 66 DQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQ---VENPYGEPCEPEDAPELI 127
Fly 128 TKTVASLPPEQMYELMKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFK 192
Fly 193 ANQMPPVL------------------------GGNPHQG--PGNHTMMGQQQ-VPQQQ------- 223
Fly 224 VQIPQQQQ-------QAPQP-PMPVPGPGFPANVHPN-----DIDLRMVPGGPMPMDPRMMGRGM 275
Fly 276 DQ--DLRASLP-NPVP----PP--LM-----DPR------ARAQMPPQQQQGVP-QAPP------ 313
Fly 314 -----------APYPSDPRQ------------------------------RPM-----DPR---- 328
Fly 329 -----------------------LRAGPGPQQQAP-----------------PQGIPQAP----- 348
Fly 349 --PPTQQQ---------------------------------------QAAAQQLQSRLGAHGVLP 372
Fly 373 SDAS---------DQEKAALIMQVLQLSDEQIAQLPSEQRVSIVMLKEQIAKST 417 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CstF64 | NP_477453.1 | RRM | <13..>112 | CDD:223796 | 70/101 (69%) |
RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 59/73 (81%) | ||
CSTF2_hinge | 112..190 | CDD:291025 | 55/77 (71%) | ||
CSTF_C | 377..416 | CDD:291002 | 29/38 (76%) | ||
Cstf2t | NP_001101056.1 | RRM | <16..>109 | CDD:223796 | 69/94 (73%) |
RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 59/73 (81%) | ||
CSTF2_hinge | 113..191 | CDD:291025 | 55/77 (71%) | ||
CSTF_C | 585..625 | CDD:291002 | 29/39 (74%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342422 | |
Domainoid | 1 | 1.000 | 124 | 1.000 | Domainoid score | I5384 |
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 303 | 1.000 | Inparanoid score | I2582 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1455080at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001914 | |
OrthoInspector | 1 | 1.000 | - | - | otm44822 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100265 | |
Panther | 1 | 1.100 | - | - | O | PTHR45735 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1629 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.800 |