DRSC/TRiP Functional Genomics Resources

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Protein Alignment CstF64 and CSTF2T

DIOPT Version :10

Sequence 1:NP_477453.1 Gene:CstF64 / 42239 FlyBaseID:FBgn0027841 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_056050.1 Gene:CSTF2T / 23283 HGNCID:17086 Length:616 Species:Homo sapiens


Alignment Length:254 Identity:53/254 - (20%)
Similarity:87/254 - (34%) Gaps:92/254 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GGETSTKQQQELKAQIKIGHY--ILKETLGVGTFGKVKVGIHETTQYKVAVKILNRQKIKSLDVV 67
            ||.|.|  ..|.....:.|.|  ||.||:|||           .:::.||            |:|
Human   215 GGVTRT--TNEAIVLCEGGGYDIILIETVGVG-----------QSEFAVA------------DMV 254

  Fly    68 GKIRREIQNLSLFRHPHIIRLYQVISTPSDIFMIMEHVSGGELFDYIVKHGRLKTAE-------- 124
                                         |:|:::...:||:....| |.|.::.|:        
Human   255 -----------------------------DMFVLLLPPAGGDELQGI-KRGIIEMADLVVITKSD 289

  Fly   125 ------ARRFFQQIISGVDYCHRHMVVHRDLKPENLLLDEQNNVKIADFGLSNIMTDGDFLRTSC 183
                  |||...:.:|.:....|...|.|   |:.:.:..::...|.:.        .|.:|   
Human   290 GDLIVPARRIQAEYVSALKLLRRRSEVWR---PKVIRISARSGEGITEM--------WDTMR--- 340

  Fly   184 GSPNYAAPEVISGKLYAGPEVD--VWSCGVILYALL--CGTLPFDDEHVPSLFRKIKSG 238
               .:....:.||:|.|..:..  ||...:|...:|  ..|.|...|.:|.:.||:.||
Human   341 ---EFQHQMLASGELAAKRQTQHKVWMWNLIQENVLEHFKTHPSIREQIPLMERKVLSG 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF64NP_477453.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072 15/85 (18%)
CSTF2_hinge 111..190 CDD:433869 15/92 (16%)
CSTF_C 377..416 CDD:464130
CSTF2TNP_056050.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072
CSTF2_hinge 112..191 CDD:433869
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..241 10/27 (37%)
PRK12323 <242..>387 CDD:481241 37/214 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..418 33/153 (22%)
9 X 5 AA tandem repeats of M-E-T-R-[AG] 418..462
9 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q 505..549
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..573
CSTF_C 572..612 CDD:464130
Blue background indicates that the domain is not in the aligned region.

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