Protein Alignment CstF64 and Tia1

DIOPT Version :9

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_035715.1
• Gene: Tia1 / 21841
• MGIID: 107914
• Length: 386
• Species: Mus musculus
• Alignment Length: 307
• Identity: 72/307 - (23%)
• Similarity: 118/307 - (38%)
• Gaps: 99/307 - (32%)

  Fly     4 KAQEQSIMDKSMRS-----VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCE 63
            |....|.:..:.||     ||||::..|.|.|.:|..|:..|.:...::|.|..:||.||:||..
Mouse    89 KDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVS 153

  Fly    64 YKDQETALSAMRNLNGYEIGGRTLRVDNACTE----KSRME------------------------ 100
            :.::..|.:|::.:.|..:|||.:|.:.|..:    ||..|
Mouse   154 FFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYC 218

  Fly   101 -------MQQLLQGPQVENPYGEPCEPEDAPELITKTVASLPPEQMYELMKQMKLCIVSNPSEAR 158
                   .:||::  |..:|:|:..|            ..:.|::.|..::     ..|:.|.|.
Mouse   219 GGVTSGLTEQLMR--QTFSPFGQIME------------IRVFPDKGYSFVR-----FSSHESAAH 264

  Fly   159 QMLMLNPQLAYALLQAMVV--------MRIVDPQQALGMLFKANQM--PPVLG--GNPHQGPGNH 211
            .::.:|.    ..::..||        :.:::|.|      :.||:  ||..|  |   |..||.
Mouse   265 AIVSVNG----TTIEGHVVKCYWGKETLDMINPVQ------QQNQIGYPPTYGQWG---QWYGNA 316

  Fly   212 TMMGQQ-----QVPQ--------QQVQIPQQQQQAP--QPPMPVPGP 243
            ..:||.     |||.        .|....|.|..||  .|...||.|
Mouse   317 QQIGQYVPNGWQVPAYGVYGQPWSQQGFNQTQSSAPWMGPNYSVPPP 363

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM	<13..>112	CDD:223796	34/138 (25%)
		RRM_CSTF2_CSTF2T	18..92	CDD:241115	25/73 (34%)
		CSTF2_hinge	112..190	CDD:291025	13/85 (15%)
		CSTF_C	377..416	CDD:291002
Tia1	NP_035715.1	ELAV_HUD_SF	6..280	CDD:273741	46/213 (22%)
		RRM1_TIA1	8..81	CDD:241059
		RRM2_TIA1	105..184	CDD:241062	26/78 (33%)
		RRM3_TIA1	214..287	CDD:241065	14/95 (15%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	355..376		4/9 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810