DRSC/TRiP Functional Genomics Resources

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Protein Alignment CstF64 and LOC1276190

DIOPT Version :10

Sequence 1:NP_477453.1 Gene:CstF64 / 42239 FlyBaseID:FBgn0027841 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_061508358.1 Gene:LOC1276190 / 1276190 VectorBaseID:AGAMI1_007483 Length:186 Species:Anopheles gambiae


Alignment Length:137 Identity:36/137 - (26%)
Similarity:55/137 - (40%) Gaps:16/137 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGYEI 82
            ||||.|..:.||.:|..:||..|.|.|.|::.|| :|..||:||..::.:..|.....:.:...:
Mosquito    28 VFVGGISGDTTEAELCRLFSSYGNVKSTKIIVDR-AGVSKGYGFVTFETEHEAQKLQNDCDCIVL 91

  Fly    83 GGRTLRVDNA------CTEKSRMEMQQLLQGPQVENPYGEPCE------PEDAPELITKTVASLP 135
            ..|.|.:..|      |.....:........|.:.|   .|.|      |...|.:...|:...|
Mosquito    92 RDRKLNIAPAIKKQTLCATNGAVYYAATPPTPAINN---IPIEQFATVYPPGVPTMYPPTLPYQP 153

  Fly   136 PEQMYEL 142
            ..|.|.:
Mosquito   154 FYQYYSV 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF64NP_477453.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072 25/81 (31%)
CSTF2_hinge 111..190 CDD:433869 9/38 (24%)
CSTF_C 377..416 CDD:464130
LOC1276190XP_061508358.1 None
Blue background indicates that the domain is not in the aligned region.

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