DRSC/TRiP Functional Genomics Resources

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Protein Alignment CstF64 and CIRBP

DIOPT Version :10

Sequence 1:NP_477453.1 Gene:CstF64 / 42239 FlyBaseID:FBgn0027841 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001287758.1 Gene:CIRBP / 1153 HGNCID:1982 Length:297 Species:Homo sapiens


Alignment Length:75 Identity:27/75 - (36%)
Similarity:49/75 - (65%) Gaps:0/75 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGYEI 82
            :|||.:.::..|:.|:::||:.|.:..:.:|.|||:.:.:||||..:::.:.|..||..:||..:
Human     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72

  Fly    83 GGRTLRVDNA 92
            .||.:|||.|
Human    73 DGRQIRVDQA 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF64NP_477453.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072 27/75 (36%)
CSTF2_hinge 111..190 CDD:433869
CSTF_C 377..416 CDD:464130
CIRBPNP_001287758.1 RRM_CIRBP_RBM3 6..85 CDD:409883 27/75 (36%)
Blue background indicates that the domain is not in the aligned region.

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