DRSC/TRiP Functional Genomics Resources

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Protein Alignment CstF64 and SRSF8

DIOPT Version :10

Sequence 1:NP_477453.1 Gene:CstF64 / 42239 FlyBaseID:FBgn0027841 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_115285.1 Gene:SRSF8 / 10929 HGNCID:16988 Length:282 Species:Homo sapiens


Alignment Length:93 Identity:26/93 - (27%)
Similarity:47/93 - (50%) Gaps:2/93 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNG 79
            |.::.|.|:.|..:.:.|:.:|.:.|.|..:.:..:..:..|:||.|..:.|:..|..|...::|
Human    13 MITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDG 77

  Fly    80 YEIGGRTLRVDNACTEKSRMEMQQLLQG 107
            .|:.||.|||..|  ...|.::.:..||
Human    78 AELDGRELRVQVA--RYGRRDLPRSRQG 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF64NP_477453.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072 23/78 (29%)
CSTF2_hinge 111..190 CDD:433869
CSTF_C 377..416 CDD:464130
SRSF8NP_115285.1 RRM_SRSF2_SRSF8 16..88 CDD:409751 20/71 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..282 3/13 (23%)
Blue background indicates that the domain is not in the aligned region.

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