DRSC/TRiP Functional Genomics Resources

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Protein Alignment CstF64 and RBM7

DIOPT Version :10

Sequence 1:NP_477453.1 Gene:CstF64 / 42239 FlyBaseID:FBgn0027841 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens


Alignment Length:222 Identity:56/222 - (25%)
Similarity:94/222 - (42%) Gaps:41/222 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGY 80
            |::||||:..:.|||.|.|:|.:.|||:.:|:..|:: ||||.|.|..:|.:.:...||..|||.
Human    10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNLLNGI 73

  Fly    81 EIGGRTLRVDNACTEKSRMEMQQLLQG----PQ-VENPYGEPCEPEDAPELITKTVASLPPEQMY 140
            ::.||.:::             |...|    || |...|.:......:|       .|..|...|
Human    74 KLYGRPIKI-------------Q
FRSGSSHAPQDVSLSYPQHHVGNSSP-------TSTSPSSRY 118

  Fly   141 E-LMKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQM-----PPV 199
            | .|..|     ::.::..|....:|:    ..|...||.....|.:.|..|.::.:     .|.
Human   119 ERTMDNM-----TSSAQIIQRSFSSPE----NFQRQAVMNSALRQMSYGGKFGSSPLDQSGFSPS 174

  Fly   200 LGGNPHQGPGNHTMMGQQQVPQQQVQI 226
            :..:.|....:.:...:|..|..|.::
Human   175 VQSHSHSFNQSSSSQWRQGTPSSQRKV 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF64NP_477453.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072 30/77 (39%)
CSTF2_hinge 111..190 CDD:433869 15/79 (19%)
CSTF_C 377..416 CDD:464130
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005 30/86 (35%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35 3/9 (33%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76 5/16 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267 5/39 (13%)
Blue background indicates that the domain is not in the aligned region.

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