Protein Alignment CstF64 and cstf2

DIOPT Version :9

• Sequence 1: NP_477453.1
• Gene: CstF64 / 42239
• FlyBaseID: FBgn0027841
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: XP_012823534.1
• Gene: cstf2 / 100170457
• XenbaseID: XB-GENE-979047
• Length: 522
• Species: Xenopus tropicalis
• Alignment Length: 514
• Identity: 229/514 - (44%)
• Similarity: 282/514 - (54%)
• Gaps: 112/514 - (21%)

  Fly    11 MDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
            :|:|:|||||||||||||||:||:||||||||:|.:||:|||:|||||:|||||:||||||||||
 Frog    11 VDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

  Fly    76 NLNGYEIGGRTLRVDNACTEKSRMEMQQLLQG-PQVENPYGEPCEPEDAPELITKTVASLPPEQM 139
            ||||.|..||.||||||.:||::.|::.|..| |.:|:|||:|..||||||.|::.|||||||||
 Frog    76 NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVSPEDAPESISRAVASLPPEQM 140

  Fly   140 YELMKQMKLCIVSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVLGGNP 204
            :|||||||||:.::|.|||.||:.|||||||||||.||||||||:.||.:|.:...:||::..|.
 Frog   141 FELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRPAVVPPMMSNNQ 205

  Fly   205 HQGPGNHTMMGQQQVPQQQVQ---------IPQQQQQAPQ-----PPM--PVPGPGFPANVHPND 253
            ..|.|.:..:.|..||..|.|         .|...|..|.     .||  |.|||.......|..
 Frog   206 QPGQGPNMPLNQPNVPVGQPQPMGAMHVNGAPPMMQTLPMQGGVPAPMGNPAPGPVLQGGALPPQ 270

  Fly   254 IDLRMVPGGPMPMDPRMMGRGMDQDLRASLPNP-----VPPPLMDPRA-------RAQMPPQ--- 303
            :.:  .||..|||:   .|:|..|....:...|     ||.|:.|.||       .|.:||:
 Frog   271 VGI--PPGAAMPME---RGQGSLQHSPVAPAGPATIERVPVPINDARAPVQRGPTAANVPPRGLL 330

  Fly   304 -----------------------------QQQGVP----QAPPAPYP------------------ 317
                                         ..||||    :..|||:.
 Frog   331 GDGPNDPRGGTLLTVTSDEQPPSRGYMAAPMQGVPPMHHERGPAPHDIRGVPMGDAPRAMLADAR 395

  Fly   318 ----SDPRQRPMDPR----LRA----GPGPQQQAPP-------QGI-PQAPPPTQQQQAAAQQLQ 362
                .|||..|||.|    .||    ||||...:.|       ||. |..|.|.:|..:....:|
 Frog   396 GAPIMDPRGPPMDARGGRDPRALEPRGPGPVPGSAPRVPVAGMQGPGPMGPQPPRQLHSEVPGIQ 460

  Fly   363 SRLGAHGVLPSDA----SDQEKAALIMQVLQLSDEQIAQLPSEQRVSIVMLKEQIAKST 417
            ......|..|..:    .|.||||||||||||:.:|||.||.|||.||::|||||.|||
 Frog   461 GASTQGGFSPGQSQVTPQDHEKAALIMQVLQLTPDQIAMLPPEQRQSILILKEQIQKST 519

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF64	NP_477453.1	RRM	<13..>112	CDD:223796	71/99 (72%)
		RRM_CSTF2_CSTF2T	18..92	CDD:241115	60/73 (82%)
		CSTF2_hinge	112..190	CDD:291025	56/77 (73%)
		CSTF_C	377..416	CDD:291002	28/38 (74%)
cstf2	XP_012823534.1	half-pint	18..>330	CDD:130706	164/316 (52%)
		RRM_CSTF2_CSTF2T	18..92	CDD:241115	60/73 (82%)
		CSTF2_hinge	112..191	CDD:373015	57/78 (73%)
		PHA03247	<207..478	CDD:223021	65/275 (24%)
		CSTF_C	478..518	CDD:373006	28/39 (72%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	125	1.000	Domainoid score	I5407
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	327	1.000	Inparanoid score	I2432
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1455080at2759
OrthoFinder	1	1.000	-	-		FOG0001914
OrthoInspector	1	1.000	-	-		oto102845
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2262
SonicParanoid	1	1.000	-	-		X1629
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	7.090