DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31224 and lsy-27

DIOPT Version :10

Sequence 1:NP_732361.1 Gene:CG31224 / 42237 FlyBaseID:FBgn0051224 Length:1784 Species:Drosophila melanogaster
Sequence 2:NP_001256739.1 Gene:lsy-27 / 180149 WormBaseID:WBGene00009834 Length:250 Species:Caenorhabditis elegans


Alignment Length:87 Identity:28/87 - (32%)
Similarity:45/87 - (51%) Gaps:9/87 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1574 DLKPK-CCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQ-IFAKTSIKAHMAT-HSTE 1635
            ||:.| .|..|...|.|:.||.||.:|.||::.      .|.||:: :..|.:|:.||.. |:..
 Worm    20 DLRGKFVCSSCSQNFQHSASLNRHRQLMHSNEH------TCMMCERALNQKETIREHMRNEHNLA 78

  Fly  1636 PQYDCAICSKSFSTKWNLKIHS 1657
            ..:.|..|:.:|::|..|..|:
 Worm    79 QVFTCGCCNWTFASKRQLTEHT 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31224NP_732361.1 C2H2 Zn finger 1466..1486 CDD:275368
C2H2 Zn finger 1494..1514 CDD:275368
zf-H2C2_2 1506..1531 CDD:463886
C2H2 Zn finger 1522..1542 CDD:275368
PHA00733 1527..1623 CDD:177301 17/50 (34%)
C2H2 Zn finger 1554..1573 CDD:275370
C2H2 Zn finger 1580..1599 CDD:275368 8/18 (44%)
C2H2 Zn finger 1613..1632 CDD:275368 7/20 (35%)
COG5048 <1637..1780 CDD:227381 6/21 (29%)
C2H2 Zn finger 1640..1660 CDD:275368 6/18 (33%)
C2H2 Zn finger 1670..1690 CDD:275368
C2H2 Zn finger 1698..1718 CDD:275368
zf-H2C2_2 1710..1733 CDD:463886
C2H2 Zn finger 1726..1746 CDD:275368
C2H2 Zn finger 1754..1774 CDD:275368
lsy-27NP_001256739.1 COG5236 <22..>122 CDD:227561 26/85 (31%)
C2H2 Zn finger 27..48 CDD:275368 9/20 (45%)
C2H2 Zn finger 54..75 CDD:275368 7/20 (35%)
C2H2 Zn finger 83..102 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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