DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31224 and Y5F2A.4

DIOPT Version :9

Sequence 1:NP_001287396.1 Gene:CG31224 / 42237 FlyBaseID:FBgn0051224 Length:1784 Species:Drosophila melanogaster
Sequence 2:NP_502063.1 Gene:Y5F2A.4 / 178004 WormBaseID:WBGene00012385 Length:454 Species:Caenorhabditis elegans


Alignment Length:299 Identity:71/299 - (23%)
Similarity:112/299 - (37%) Gaps:94/299 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1494 CYVCDKKFVVRSALVEH-MRMH----------TGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMV 1547
            |..|.|.|.::..|.:| :|||          :...||||.:|.|.|.|.|:|.:|:..|..:  
 Worm     6 CQDCGKTFDLKRYLTKHELRMHKNVVKSKNDRSASDPLKCSMCDKVFPRLSHLQRHQMTHLNV-- 68

  Fly  1548 RKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSD----KFDYA 1608
              :.|                          .|.:|.::||..:.|.||:...||:    :.|:.
 Worm    69 --RNY--------------------------SCTFCEEKFVQKSHLTRHVSRKHSNAPGVEVDWT 105

  Fly  1609 EPMECPMCKQIFAKT-SIKAHMATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEY 1672
               .|..|.|:|..| .::.|..|:.                    ::|            ||:.
 Worm   106 ---ACDKCGQLFKTTYEMRIHRQTYH--------------------ELH------------KCKQ 135

  Fly  1673 CPKAFVRELD-FKNHINAHKQIKPYT--CEYCGCKFIRKYNYMRHRREHHGTKK--FTCDQCDKS 1732
            |.:......| .:.|   |.|.:.|:  |:.||..|.|..:.:.|  |....||  |.|..||..
 Worm   136 CQEVIEAGSDGLRKH---HMQCRKYSNVCDECGASFSRPADLVSH--ETSCLKKFAFVCKPCDSY 195

  Fly  1733 FHRHYYLIEH-RRMHTGERPFTCTICGKSSTTKTNHNKH 1770
            |.:...|..| ::.|.  .|..|:.|.:.|.|...:::|
 Worm   196 FRQRVQLDRHIKKAHF--HPTKCSKCEQISDTPVQNSRH 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31224NP_001287396.1 C2H2 Zn finger 1466..1486 CDD:275368
C2H2 Zn finger 1494..1514 CDD:275368 7/20 (35%)
zf-H2C2_2 1506..1531 CDD:290200 12/35 (34%)
C2H2 Zn finger 1522..1542 CDD:275368 8/19 (42%)
PHA00733 1527..1623 CDD:177301 22/99 (22%)
C2H2 Zn finger 1554..1573 CDD:275370 0/18 (0%)
C2H2 Zn finger 1580..1599 CDD:275368 7/18 (39%)
C2H2 Zn finger 1613..1632 CDD:275368 6/19 (32%)
COG5048 <1637..1780 CDD:227381 32/140 (23%)
C2H2 Zn finger 1640..1660 CDD:275368 1/19 (5%)
C2H2 Zn finger 1670..1690 CDD:275368 4/20 (20%)
C2H2 Zn finger 1698..1718 CDD:275368 6/19 (32%)
zf-H2C2_2 1710..1735 CDD:290200 9/26 (35%)
C2H2 Zn finger 1726..1746 CDD:275368 6/20 (30%)
zf-H2C2_2 1738..1763 CDD:290200 7/25 (28%)
C2H2 Zn finger 1754..1774 CDD:275368 5/17 (29%)
Y5F2A.4NP_502063.1 C2H2 Zn finger 6..27 CDD:275368 7/20 (35%)
zf-C2H2 44..65 CDD:278523 9/20 (45%)
C2H2 Zn finger 45..65 CDD:275368 8/19 (42%)
C2H2 Zn finger 73..94 CDD:275368 7/20 (35%)
C2H2 Zn finger 107..126 CDD:275368 6/18 (33%)
C2H2 Zn finger 161..181 CDD:275368 7/21 (33%)
C2H2 Zn finger 189..212 CDD:275368 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I3725
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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