DRSC/TRiP Functional Genomics Resources

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Protein Alignment qin and tdrd6

DIOPT Version :9

Sequence 1:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster
Sequence 2:XP_694024.6 Gene:tdrd6 / 565665 ZFINID:ZDB-GENE-041001-210 Length:2117 Species:Danio rerio


Alignment Length:2022 Identity:372/2022 - (18%)
Similarity:684/2022 - (33%) Gaps:595/2022 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 YCRRCFD----------AVHKRSRVLKSHIFRNSTEQDSSF----SKKLRV---------GDQYF 201
            |.|.||.          .|.......::.|....:::.|.|    .:.||.         .|.::
Zfish    53 YPRECFSESDGNPGDLCLVQVYETWYRARIVSRDSDEYSVFLIDEGRTLRAAVNTLAWGKSDFFY 117

  Fly   202 TLPSQNLCIHHR----MPKDKY---CMKCYRSHCQICSTVHHSGHRIRKLIE----INQSYASEI 255
            ..|....||...    .|::.:   .::..::.|         |.|:...::    .::::..:|
Zfish   118 LPPEVEFCILANALPLSPENNWSSMALEFMKTFC---------GRRVNATVQDVLVAHRTFLLDI 173

  Fly   256 PTTLNSL-NMAHIHVLNGKQVVQRAKQKLNDYATETLASISKRFSHLHGLLQVAELQVIE--KLR 317
            |.....: .|.....|...|.::...:.|.   ..|..|..||.|.    ::...:::||  :.:
Zfish   174 PCLSRQMFEMGFAKKLYSDQFMEFVVRSLQ---ASTGTSDLKRISS----IRTKPVEIIEQKEKQ 231

  Fly   318 ESSLPPQLKLNEAMGQLSGYETVI-------------------------ERLTKSLNSGVGNDMA 357
            ::.:.|:|       |....|||:                         |::|:.....||:..|
Zfish   232 QAYMFPEL-------QTDTVETVVITEVTSPFRIFCQLKVFSQELKKLTEQITQYYEGRVGSYFA 289

  Fly   358 ---------VPRDVSLRWLLKLICEHLEKIPTTVQVSKVDENPYRVTCSRFMDISNI-------- 405
                     ..|....:| .:.:.:.:......|:|..||...     .:|:.:.|:        
Zfish   290 RAENLGSPCASRGSDGKW-YRSVLQQVMSANNVVEVLHVDYGK-----KQFVQVENVKPLASEFF 348

  Fly   406 ------FKCE---FVNPNI-----QVCFKTDLEISRSL------SSSPKGEITFLTSSSSSKEN- 449
                  :.|.   .|:..:     |:.:...|.::|::      .|..:| :.::|.......| 
Zfish   349 RMPVVTYVCSLHGIVDKGVGWTASQIDYLKSLLLNRTVIAKFQYQSLSEG-VHYVTLYGEENTNI 412

  Fly   450 ---FDPHSRKLLLAQNSKLKKATQVS-QSQKKRGKNATEVAQSSLNSTAAIIDEFPAKDLDFLHN 510
               |:...:..|.:..:....|.|.| .|||.:....||  .:.:|.|                 
Zfish   413 NKLFELKPKCSLDSDMTLADFAVQKSPSSQKSKISRTTE--STHINET----------------- 458

  Fly   511 FSSLDITKRNKTTEDSSDWFKTDTLVR-------VRSVQSPEDFYVQGIHAAQRLREELDTFAHT 568
            :|.|.:.|         ..|.|:||..       |:.|.||..|::|    .||..:|.|...:.
Zfish   459 YSDLKVNK---------PVFFTETLTPNSTHMAVVQHVDSPGKFWIQ----TQRYADEFDLLMNG 510

  Fly   569 L----SDSSSVPPTI---VVGQNYIIHHKDKDR-YYRALVSQKLTNENLYNVFLTDIGVHLHVRC 625
            |    ||.:|....|   |||  .|...|.:|. :|||.|.:.:  :....|:..|.|....|..
Zfish   511 LGNLYSDPTSTESLIRKPVVG--LICAAKAQDGVFYRAAVYKVI--DKTAEVYFLDYGNTEVVDS 571

  Fly   626 SDFRVVPERISHLPYSAVHCSLSELMPKNGESEWDSKASAFLKQIVQNNPVRVIVKKALTYELHG 690
            .:.|.:|.|...||..||.|||..:.|:  ...|:.:|:.|..::|::..:.:.|:.. ..:.|.
Zfish   572 FNLRQLPLRFQQLPAVAVKCSLHGVKPR--LKLWEERATLFFSKLVRDRIIDLHVQDK-QQDTHI 633

  Fly   691 VDLITSNYDTNISVRDSFLYCGLAISR-----------------DGAPLWL----PPAP------ 728
            |.|:..:.|....|.......|.|:|.                 ..:.::|    |..|      
Zfish   634 VQLVDPSLDGEKDVSKLLCNAGFAVSEKSIVDYSATRSCGLKTTHASGVFLTGTQPQTPCSSSVV 698

  Fly   729 --TALRLPRISFRFGDVYMVQMLHVEDPQEFYVMRHDYEKKRLWLQFSLQEAMDRINISQLQNI- 790
              :|.......|..|....|.:.::|:|.:|            |.|.:...|...:.:..:|.. 
Zfish   699 MDSASAFKEYLFPIGSSLEVTVSYIENPNDF------------WCQKARNAACLEVLMQDIQRFY 751

  Fly   791 ----FLGQLHLGCVLQ--SGGQWKRASIEQILPDGYVLVHLVDEGPSQKVFWDQLFVLPQKFWD- 848
                |...|...||.:  ..|.|.||.:.|.....:|.|..:|.|.::||..:.|..:...|.. 
Zfish   752 SHSEFEPLLEAACVARHPETGIWYRALVIQKHQTPHVDVLFIDYGQTKKVAIEDLRKITPAFLKM 816

  Fly   849 TGLAIKCCLADVETRAEHSYT-WTPEGTTLFKQLTSNPRLYMDVISCT--------EDLVYVSLH 904
            .|.|.:|.|.::.....||.: |:.|.|..|::...........:.||        :.:|:..:.
Zfish   817 KGQAFRCSLYNLIHPVLHSSSDWSTEATLEFQEFVDAAASMNVPLKCTIFAVMYDSQKVVFNVVD 881

  Fly   905 FERSNSETTSVGVQLVAHGHCTSSGESSRMITPTVSNRSVRFDEETKKFIAQQKVRPVELSPYRM 969
            .|.......::.||             .|:.....|.||                   .|.|:|:
Zfish   882 LETPFQSICNLLVQ-------------RRLADRAPSKRS-------------------PLPPFRL 914

  Fly   970 PD---NTERNKR---TTVNILYVRKPDEFYVTLPHFQKAINNLQKSVQKAAAAMYQNMLPRTDWQ 1028
            ..   :|...|.   ..|:|..|:..::|:.   |..:..:.::|..:|.....:|....:....
Zfish   915 DTYYYSTHGVKTGCDEKVSITCVKGVNQFFC---HLARNSDEVEKLAEKVNFLCHQLEATKCPQT 976

  Fly  1029 VGDMCYARVQANCDSQALWYRGVVTGVIPPGITCPIVRYQVHLRDLGELIDDVHSSSL--ANIDE 1091
            .|.:|:|:.     :..|||||.:....|..:        ::..|.|:.: :|..|.|  ..|:.
Zfish   977 FGTVCFAKY-----TDGLWYRGQIKSTKPSVV--------INFVDYGDTL-EVDKSDLLPVPIEA 1027

  Fly  1092 AD-MRISSSAKRCHLHGIRPIGDEWSKDAIDFFMDQLKAYNEIHVTGRGRTENSLSVILWGSLSI 1155
            .| |.:...|..|   |:..:.:|...:..::|    :.:.:.|              .:.:|.:
Zfish  1028 GDIMSVPVQAIEC---GLSDMPEELPCEVDNWF----RKFADSH--------------CFTALIV 1071

  Fly  1156 LTGPFSPATIKYVNINKALLMAGMAEKDHNSDSEDDQQSMPENVSVNSEEAAKANDWESCLSKID 1220
            ...|.....::..: .|..:.|.:.:|.||...::|..:.  .:......||::.:..:| .|..
Zfish  1072 AKEPAGKLILELYD-GKTQVNALIKQKFHNEIHKNDASTF--KIYGLKSRAAESVEASAC-KKES 1132

  Fly  1221 GTSKTNDSLNLIESRSVTVGFEHNEDMPPLALLEDLGNTKNTTGETTPPAGWTTRRKCDKSVFTA 1285
            .|....|:::.:.....:...:.:.|:.........|.:.|...|.|..:|  |...|.|.  ..
Zfish  1133 STGPKRDAIDQVPKSRESHAIQRSNDVASKQPQSRWGFSTNGRPEPTRDSG--TINNCQKQ--PE 1193

  Fly  1286 IAT---NVTYECC-----------------IYLTLASDKP------FIEHMGN------------ 1312
            :.|   |:.:.|.                 ..|.:.|.||      ||.|..:            
Zfish  1194 LRTSQGNLRHPCTSSKPEVVKPKPQALLKESALPIKSIKPGLEAEVFISHCNSPCSFFVQFATDE 1258

  Fly  1313 ----LLVREYKPLMDKQKERSTSYTYKVGQAVVVTYHMDNMIYRGIVQRLENNHNEYTVYYVDYG 1373
                .||.:......:.:...:|..:: |..|...:..|:..||.:|::  |.:.:..|.:||:|
Zfish  1259 DDIYSLVEKLNADQSRCRNIDSSDIHE-GDLVCAMFPDDSSWYRAVVRK--NTNEKIDVEFVDFG 1320

  Fly  1374 NMELVKADEML----PYAPFPDLNAMCFLVELHGVRSKQGKYSLKEMDTVHLNL------VMKLS 1428
            |..::.:..:.    .:|.||..:..|.:.:|: |.||..:.:......:..|:      .:|:|
Zfish  1321 NTAVISSKNVCHLGQSFASFPRYSIHCSVHKLN-VDSKDQELAPNFKQVLEQNIEKVICTFVKMS 1384

  Fly  1429 G----VRI---------VDDETVGPN-KIPKCQIKVGNVDIATMMIDSGMSVPIEKQTIKNNTKY 1479
            |    ||:         |..:.|.|. .||..:.....:.:.|...:..:|:   .|.|...|.|
Zfish  1385 GTMWEVRLDVNGVVLGSVCKDHVKPEIAIPDLKDAASEIKVCTYYKNPDISI---GQVITGYTSY 1446

  Fly  1480 LPS-QKFLEDFKVFDELDHLA--------AGEGELSDK-------------------EAPPTQRK 1516
            :.. |.|...:...|:|..::        |.|..|.:.                   .|..|.:.
Zfish  1447 IKGPQLFWCQYVAMDKLQEISDMLQNIGNASETTLREDCMPVGSACIALFTEDNLWYRAKVTSKD 1511

  Fly  1517 HDSIS---------------SVQQPPTKKFLVDQE----EVEAFECDQDF--------------- 1547
            .|::|               .|:..|.|...|...    ::|.|:..:.|               
Zfish  1512 LDTLSITFVDYGNESKVKIGDVKALPPKLSDVPPHAFDCQLEGFDVSEGFWDETADDAFYELVHD 1576

  Fly  1548 ---------------------DCQ----QAAQKMH------------LNNNFYLGDFGKYA---- 1571
                                 ||.    ....|.|            |.|...:.....|.    
Zfish  1577 KPLNITIEKMGNSEMPHIVKLDCDGVDINTTMKSHWKTRNPETPPAELFNGAEMASDDDYVASKV 1641

  Fly  1572 --DETTARDED-EPHSNS--SKSIDMEVFAN---------VNDSQLEPLNSFATEQLIRRIALRQ 1622
              |.....|.| :|..|.  :.:::||:...         .|::|::|| ..|||          
Zfish  1642 NIDSVVTFDTDTDPADNETCTSALEMELSEQENLLSSTGVENEAQIDPL-KMATE---------- 1695

  Fly  1623 QEIKDSITFSPIDTSSVRSFYDASASFKTLSLPNGVKEF-------------------------- 1661
                 ::|. ||..|:|.|  :.....:|::....|..|                          
Zfish  1696 -----NVTL-PITESTVLS--ETHKKLETITEDEPVLGFTGLSDTNQHAVSKETDVGLPQHSEGA 1752

  Fly  1662 -YCTVDN-VLSDTELQIAPCL---SEFTKHEISLIQETSTLIKDAEPLMEPK-VGDLCLARYSRD 1720
             ..|:|: ::::|:.|:  |:   .|...:||  ||.....::.|   .|.| ||..|:......
Zfish  1753 SSVTIDSFLMNNTDSQL--CIVEEPEAPSYEI--IQSNLGCLRRA---TEKKPVGSECVIWSQVR 1810

  Fly  1721 KQWYRANIKEISPILSPTSEQVTVFYIDFHDTEKV--SFNHLKVMPSQLFMFPLRSFCVKLHGIK 1783
            :.|..|.:.::       ||:.|:..::.:|:|.|  ..|..::||.:    ||:..|::. .|.
Zfish  1811 RSWCTARVLKV-------SEEATLVLLEKYDSEVVVDPINIFEIMPEK----PLQIACIEA-AIA 1863

  Fly  1784 RNKSFKE 1790
            .:.:.||
Zfish  1864 NDDATKE 1870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qinNP_650735.3 zf-RING_5 25..75 CDD:291308
BBOX 139..174 CDD:197662 5/23 (22%)
TUDOR 536..648 CDD:278965 38/126 (30%)
TUDOR 741..859 CDD:278965 30/125 (24%)
TUDOR <805..839 CDD:119391 11/33 (33%)
TUDOR 981..1107 CDD:278965 27/128 (21%)
TUDOR 1296..1403 CDD:278965 27/132 (20%)
TUDOR 1337..1385 CDD:119391 12/51 (24%)
TUDOR 1710..1761 CDD:119391 11/52 (21%)
tdrd6XP_694024.6 Tudor_SF 6..132 CDD:413384 14/78 (18%)
Tudor_TDRD6_rpt2 233..361 CDD:410492 20/140 (14%)
Tudor_SF 482..613 CDD:413384 43/140 (31%)
Tudor_SF 705..828 CDD:413384 31/134 (23%)
Tudor_SF 917..1042 CDD:413384 29/144 (20%)
Tudor_SF 1238..1349 CDD:413384 22/113 (19%)
Tudor_SF 1440..1579 CDD:413384 21/138 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25033
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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