DRSC/TRiP Functional Genomics Resources

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Protein Alignment qin and tdrd6a

DIOPT Version :10

Sequence 1:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster
Sequence 2:NP_001410719.2 Gene:tdrd6a / 565665 ZFINID:ZDB-GENE-041001-210 Length:2117 Species:Danio rerio


Alignment Length:1961 Identity:362/1961 - (18%)
Similarity:675/1961 - (34%) Gaps:572/1961 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 DQYFTLPSQNLCIHHR----MPKDKY---CMKCYRSHCQICSTVHHSGHRIRKLIE----INQSY 251
            |.::..|....||...    .|::.:   .::..::.|         |.|:...::    .::::
Zfish   114 DFFYLPPEVEFCILANALPLSPENNWSSMALEFMKTFC---------GRRVNATVQDVLVAHRTF 169

  Fly   252 ASEIPTTLNSL-NMAHIHVLNGKQVVQRAKQKLNDYATETLASISKRFSHLHGLLQVAELQVIE- 314
            ..:||.....: .|.....|...|.::...:.|.   ..|..|..||.|.    ::...:::|| 
Zfish   170 LLDIPCLSRQMFEMGFAKKLYSDQFMEFVVRSLQ---ASTGTSDLKRISS----IRTKPVEIIEQ 227

  Fly   315 -KLRESSLPPQLKLNEAMGQLSGYETVI-------------------------ERLTKSLNSGVG 353
             :.:::.:.|:|       |....|||:                         |::|:.....||
Zfish   228 KEKQQAYMFPEL-------QTDTVETVVITEVTSPFRIFCQLKVFSQELKKLTEQITQYYEGRVG 285

  Fly   354 NDMA---------VPRDVSLRWLLKLICEHLEKIPTTVQVSKVDENPYRVTCSRFMDISNI---- 405
            :..|         ..|....:| .:.:.:.:......|:|..||...     .:|:.:.|:    
Zfish   286 SYFARAENLGSPCASRGSDGKW-YRSVLQQVMSANNVVEVLHVDYGK-----KQFVQVENVKPLA 344

  Fly   406 ----------FKCE---FVNPNI-----QVCFKTDLEISRSL------SSSPKGEITFLTSSSSS 446
                      :.|.   .|:..:     |:.:...|.::|::      .|..:| :.::|.....
Zfish   345 SEFFRMPVVTYVCSLHGIVDKGVGWTASQIDYLKSLLLNRTVIAKFQYQSLSEG-VHYVTLYGEE 408

  Fly   447 KEN----FDPHSRKLLLAQNSKLKKATQVS-QSQKKRGKNATEVAQSSLNSTAAIIDEFPAKDLD 506
            ..|    |:...:..|.:..:....|.|.| .|||.:....||  .:.:|.|             
Zfish   409 NTNINKLFELKPKCSLDSDMTLADFAVQKSPSSQKSKISRTTE--STHINET------------- 458

  Fly   507 FLHNFSSLDITKRNKTTEDSSDWFKTDTLVR-------VRSVQSPEDFYVQGIHAAQRLREELDT 564
                :|.|.:.|         ..|.|:||..       |:.|.||..|::|    .||..:|.|.
Zfish   459 ----YSDLKVNK---------PVFFTETLTPNSTHMAVVQHVDSPGKFWIQ----TQRYADEFDL 506

  Fly   565 FAHTL----SDSSSVPPTI---VVGQNYIIHHKDKDR-YYRALVSQKLTNENLYNVFLTDIGVHL 621
            ..:.|    ||.:|....|   |||  .|...|.:|. :|||.|.:.:  :....|:..|.|...
Zfish   507 LMNGLGNLYSDPTSTESLIRKPVVG--LICAAKAQDGVFYRAAVYKVI--DKTAEVYFLDYGNTE 567

  Fly   622 HVRCSDFRVVPERISHLPYSAVHCSLSELMPKNGESEWDSKASAFLKQIVQNNPVRVIVKKALTY 686
            .|...:.|.:|.|...||..||.|||..:.|:  ...|:.:|:.|..::|::..:.:.|:.. ..
Zfish   568 VVDSFNLRQLPLRFQQLPAVAVKCSLHGVKPR--LKLWEERATLFFSKLVRDRIIDLHVQDK-QQ 629

  Fly   687 ELHGVDLITSNYDTNISVRDSFLYCGLAISR-----------------DGAPLWL----PPAP-- 728
            :.|.|.|:..:.|....|.......|.|:|.                 ..:.::|    |..|  
Zfish   630 DTHIVQLVDPSLDGEKDVSKLLCNAGFAVSEKSIVDYSATRSCGLKTTHASGVFLTGTQPQTPCS 694

  Fly   729 ------TALRLPRISFRFGDVYMVQMLHVEDPQEFYVMRHDYEKKRLWLQFSLQEAMDRINISQL 787
                  :|.......|..|....|.:.::|:|.:|            |.|.:...|...:.:..:
Zfish   695 SSVVMDSASAFKEYLFPIGSSLEVTVSYIENPNDF------------WCQKARNAACLEVLMQDI 747

  Fly   788 QNI-----FLGQLHLGCVLQ--SGGQWKRASIEQILPDGYVLVHLVDEGPSQKVFWDQLFVLPQK 845
            |..     |...|...||.:  ..|.|.||.:.|.....:|.|..:|.|.::||..:.|..:...
Zfish   748 QRFYSHSEFEPLLEAACVARHPETGIWYRALVIQKHQTPHVDVLFIDYGQTKKVAIEDLRKITPA 812

  Fly   846 FWD-TGLAIKCCLADVETRAEHSYT-WTPEGTTLFKQLTSNPRLYMDVISCT--------EDLVY 900
            |.. .|.|.:|.|.::.....||.: |:.|.|..|::...........:.||        :.:|:
Zfish   813 FLKMKGQAFRCSLYNLIHPVLHSSSDWSTEATLEFQEFVDAAASMNVPLKCTIFAVMYDSQKVVF 877

  Fly   901 VSLHFERSNSETTSVGVQLVAHGHCTSSGESSRMITPTVSNRSVRFDEETKKFIAQQKVRPVELS 965
            ..:..|.......::.||             .|:.....|.||                   .|.
Zfish   878 NVVDLETPFQSICNLLVQ-------------RRLADRAPSKRS-------------------PLP 910

  Fly   966 PYRMPD---NTERNKR---TTVNILYVRKPDEFYVTLPHFQKAINNLQKSVQKAAAAMYQNMLPR 1024
            |:|:..   :|...|.   ..|:|..|:..::|:.   |..:..:.::|..:|.....:|....:
Zfish   911 PFRLDTYYYSTHGVKTGCDEKVSITCVKGVNQFFC---HLARNSDEVEKLAEKVNFLCHQLEATK 972

  Fly  1025 TDWQVGDMCYARVQANCDSQALWYRGVVTGVIPPGITCPIVRYQVHLRDLGELIDDVHSSSL--A 1087
            .....|.:|:|:.     :..|||||.:....|..:        ::..|.|:.: :|..|.|  .
Zfish   973 CPQTFGTVCFAKY-----TDGLWYRGQIKSTKPSVV--------INFVDYGDTL-EVDKSDLLPV 1023

  Fly  1088 NIDEAD-MRISSSAKRCHLHGIRPIGDEWSKDAIDFFMDQLKAYNEIHVTGRGRTENSLSVILWG 1151
            .|:..| |.:...|..|   |:..:.:|...|..::|    :.:.:.|              .:.
Zfish  1024 PIEAGDIMSVPVQAIEC---GLSDMPEELPCDVDNWF----RKFADSH--------------CFT 1067

  Fly  1152 SLSILTGPFSPATIKYVNINKALLMAGMAEKDHNSDSEDDQQSMPE-NVSVNSEEAAKANDWESC 1215
            :|.:...|.....::..: .|..:.|.:.:|.||...::|..:..: .:...:.|:.:|    |.
Zfish  1068 ALIVAKEPAGKLILELYD-GKTQVNALIKQKFHNEIHKNDASTFKKYGLKSRAAESVEA----SA 1127

  Fly  1216 LSKIDGTSKTNDSLNLIESRSVTVGFEHNEDMPPLALLEDLGNTKNTTGETTPPAGWTTRRKCDK 1280
            ..|...|....|:::.:.....:...:.:.|:.........|.:.|...|.|..:|  |...|.|
Zfish  1128 CKKESSTGPKRDAIDQVPKSRESHAIQRSNDVASKQPQSRWGFSTNGRPEPTRDSG--TINNCQK 1190

  Fly  1281 SVFTAIAT---NVTYECCI-----------------YLTLASDKP------FIEHMGN------- 1312
            .  ..:.|   |:.:.|..                 .|.:.|.||      ||.|..:       
Zfish  1191 Q--PELRTSQGNLRHPCTFSKPEVVKPKPQALLKESALPIKSIKPGLEAEVFISHCNSPCSFFVQ 1253

  Fly  1313 ---------LLVREYKPLMDKQKERSTSYTYKVGQAVVVTYHMDNMIYRGIVQRLENNHNEYTVY 1368
                     .||.:......:.:...:|..:: |..|...:..|:..||.:|::  |.:.:..|.
Zfish  1254 FATDEDDIYSLVEKLNADQSRCRNIDSSDIHE-GDLVCAMFPDDSSWYRAVVRK--NTNEKIDVE 1315

  Fly  1369 YVDYGNMELVKADEML----PYAPFPDLNAMCFLVELHGVRSKQGKYSLKEMDTVHLNL------ 1423
            :||:||..::.:..:.    .:|.||..:..|.:.:|: |.||..:.:......:..|:      
Zfish  1316 FVDFGNTAVISSKNVCHLGQSFASFPRYSIHCSVHKLN-VDSKDQELAPNFKQVLEQNIEKVICT 1379

  Fly  1424 VMKLSG----VRI---------VDDETVGPN-KIPKCQIKVGNVDIATMMIDSGMSVPIEKQTIK 1474
            .:|:||    ||:         |..:.|.|. .||..:.....:.:.|...:|.:|:   .|.|.
Zfish  1380 FVKMSGTMWEVRLDVNGVVLGSVCKDHVKPEIAIPDLKDAASEIKVCTYYKNSDISI---GQVIT 1441

  Fly  1475 NNTKYLPS-QKFLEDFKVFDELDHLA--------AGEGELSDK-------------------EAP 1511
            ..|.|:.. |.|...:...|:|..::        |.|..|.:.                   .|.
Zfish  1442 GYTSYIKGPQLFWCQYVAMDKLQEISDMLQNIGNASETTLREDCMPVGSACIALFTEDNLWYRAK 1506

  Fly  1512 PTQRKHDSIS---------------SVQQPPTKKFLVDQEEVEAFECD-QDFDCQQAAQKMHLNN 1560
            .|.:..|::|               .|:..|.|   :......||:|. :.||..:.......::
Zfish  1507 VTSKDLDTLSITFVDYGNESKVKLGDVKALPPK---LSDVPPHAFDCQLEGFDVSEGFWDETADD 1568

  Fly  1561 NFY--------------LG----------DFGKYADETT------ARDEDEPHS---NSSKSI-- 1590
            .||              :|          |.......||      .|:.:.|.:   |.::.:  
Zfish  1569 AFYELVNDKPLNITIEKMGNSEMPHIVKLDCDGVDINTTMKSHWKTRNPETPPAELFNGAEMVSD 1633

  Fly  1591 DMEVFANVN-------DSQLEPL-NSFATEQLIRRIALRQQE-------IKDSITFSPIDTSSVR 1640
            |..|.:.||       |:..:|. |...|..|  .:.|.:||       :::.....|:..::  
Zfish  1634 DDYVASKVNIDSVVTFDTDTDPADNETCTSAL--EMELSEQENLLSSTGVENEAQIDPLKMAT-- 1694

  Fly  1641 SFYDASASFKTLSLPNGVKEFYCTVDNVLSDTELQI--------APC---LSEFTKHEIS----- 1689
                     :.::||       .|...|||:|..::        |.|   ||:..:|.:|     
Zfish  1695 ---------ENVTLP-------ITESTVLSETHKKLETITEDEPALCFTGLSDTNQHAVSKETDL 1743

  Fly  1690 -----------------LIQETST---LIKDAE----PLMEPKVGDLCLARYSRDK--------- 1721
                             |:..|.:   ::::.|    .:::..:|  ||.|.:..|         
Zfish  1744 GLPQHSEGASSVTIDSFLMNNTDSQLCIVEEPEAPSYEIIQSNLG--CLRRATEKKPVGSECVIW 1806

  Fly  1722 -----QWYRANIKEISPILSPTSEQVTVFYIDFHDTEKV--SFNHLKVMPSQLFMFPLRSFCVKL 1779
                 .|..|.:.::       ||:.|:..::.:|:|.|  ..|..::||.:    ||:..|::.
Zfish  1807 SQVRRSWCTARVLKV-------SEEATLVLLEKYDSEVVVDPINIFEIMPEK----PLQIACIEA 1860

  Fly  1780 HGIKRNKSFKE 1790
             .|..:.:.||
Zfish  1861 -AIANDDATKE 1870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qinNP_650735.3 zf-RING_5 25..76 CDD:434085
Bbox1 140..178 CDD:380815
Bbox2 208..244 CDD:380814 6/42 (14%)
TUDOR 536..648 CDD:425754 38/126 (30%)
TUDOR 742..859 CDD:425754 29/124 (23%)
Tudor_SF 989..1139 CDD:470623 29/152 (19%)
TUDOR 1296..1403 CDD:425754 27/149 (18%)
TUDOR <1703..1781 CDD:425754 19/93 (20%)
tdrd6aNP_001410719.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1125..1216 17/98 (17%)
Blue background indicates that the domain is not in the aligned region.

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