DRSC/TRiP Functional Genomics Resources

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Protein Alignment qin and akap1b

DIOPT Version :9

Sequence 1:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster
Sequence 2:NP_001091649.2 Gene:akap1b / 556208 ZFINID:ZDB-GENE-030131-6844 Length:837 Species:Danio rerio


Alignment Length:529 Identity:97/529 - (18%)
Similarity:158/529 - (29%) Gaps:162/529 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 LNGKQ------------VVQRAKQKLNDYATETLASISKRFSHLHGLLQVAELQVIEKLRESSLP 322
            ||||:            ..|.|::.:|.....:|..:.:.... .|||.|...:.:|     |.|
Zfish   339 LNGKEESSQLPKSAESRAAQIAEEIVNGCLAPSLWKMPENEKD-RGLLSVPSGEQLE-----STP 397

  Fly   323 PQLKL--NEAMGQLSGYETVIERLTKSLNSGVGNDMAVPRDVSLRWLLKLICEHLEKIPTTVQVS 385
            ...||  .||:.:.||..|.      ....||.::     |:           |...:.:||..|
Zfish   398 TLAKLQAEEALVEDSGCSTC------QSEDGVSSE-----DL-----------HSTGLSSTVSES 440

  Fly   386 KVDENPYRVTCSRF--------------------MDISNIFK-CEFVNPNIQVCFKTDLEISRSL 429
            |.|......||...                    :...|:.. ||....|           ...|
Zfish   441 KEDLIQISGTCKATEGQEDRLHESLALIAPQESPLTAENVATVCEAARLN-----------GTGL 494

  Fly   430 SSSPKGEITFLTSSSSSKENFDPHSRKLLLAQNSKLKKATQVSQSQK------------------ 476
            .:....|:....|..|...:.|.......|........|:|..|||.                  
Zfish   495 RNGAASEVDADQSGGSDVNSMDSVDSCSTLGAGDGQLSASQTCQSQSSELIVWEIEVPKHLVGRL 559

  Fly   477 --KRGKNATEVAQSS-------------------LNSTAAIIDEFPA------KDLDFLHNFS-- 512
              |:|:..:.:.|||                   :..|...:|:..|      ||||..:.::  
Zfish   560 IGKQGRYVSFLKQSSGAKIYISTLPYTQEFQICHIEGTQQQVDKALALIGKKFKDLDLTNLYAPP 624

  Fly   513 -------SLDITKRNKTTEDSSDWF-----KTDTLVRVRSVQSPEDFYVQGIHAAQRLREELDT- 564
                   ||.:|          .|.     .|..::.|..|.:...|..|..|........||. 
Zfish   625 PPPLTLPSLPMT----------SWLLLPSGVTVEVIVVNIVSAGHVFVQQHTHPTYHALRSLDQQ 679

  Fly   565 --FAHTLSDSSSVPPTIVVGQNYIIHHKDKDRYYRALVSQKLTNENLYNVFLTDIGVHLHVRCSD 627
              ..::...:..:|..:.||........| ..::||.|.....:.....:...|.|.:..|:...
Zfish   680 MFLCYSQPGTPPLPSPVEVGVICAAPAVD-GAWWRAQVISFYKDSTEVEIRYVDYGGYDRVKIDT 743

  Fly   628 FRVVPERISHLPYSAVHCSLSELMPKNGESEWDSKASAFLKQIVQNNPVRVIVKKALTYELHGVD 692
            .|.:......||:......|..:.|..||..:.::|::.|:::.:..|:...|            
Zfish   744 LRQIRSDFVTLPFQGTEVLLDNIAPLPGEDRFSAEANSALEEMTRGVPLLAQV------------ 796

  Fly   693 LITSNYDTN 701
               :|||.|
Zfish   797 ---TNYDNN 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qinNP_650735.3 zf-RING_5 25..75 CDD:291308
BBOX 139..174 CDD:197662
TUDOR 536..648 CDD:278965 20/114 (18%)
TUDOR 741..859 CDD:278965
TUDOR <805..839 CDD:119391
TUDOR 981..1107 CDD:278965
TUDOR 1296..1403 CDD:278965
TUDOR 1337..1385 CDD:119391
TUDOR 1710..1761 CDD:119391
akap1bNP_001091649.2 KH-I 548..608 CDD:238053 8/59 (14%)
TUDOR 641..765 CDD:278965 22/124 (18%)
TUDOR 694..751 CDD:197660 10/57 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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