DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qin and tdrd7a

DIOPT Version :9

Sequence 1:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster
Sequence 2:NP_001092813.1 Gene:tdrd7a / 406379 ZFINID:ZDB-GENE-040426-2103 Length:1079 Species:Danio rerio


Alignment Length:1265 Identity:229/1265 - (18%)
Similarity:390/1265 - (30%) Gaps:439/1265 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 VAELQVIEKLRESSLPPQLKLNEAMGQLS----------------GYETVIERLTKSLNSGVGND 355
            ::::::::|:..:.|... |...||.:|.                |::| :|...:|:...|..:
Zfish     1 MSDVELVKKMLRAVLQSS-KHGVAMARLQGDYRALTGEMIPFRKFGHDT-LESFLRSIPGVVRLE 63

  Fly   356 MAVPRDVSLRWLLKLICEHLEKIPTTVQVSKVDENPYRVTCSRFMDI------SNIFKCEFVNPN 414
            .::..:|   .....:||....|...|...|   |..:..||:.::.      |::|. ..|.|.
Zfish    64 RSIAGEV---MCFAGVCEETAHIAQLVARQK---NVKKTGCSKLLNFQMRTRTSHLFS-HNVKPR 121

  Fly   415 IQVCFKTDLEISRSLSSSPKGEITFLTSSSSSKENFD-PHSRKLLLAQNSK-------------- 464
            :      .|....:::...:|.:|...|:.....:.| |.||......|.|              
Zfish   122 L------SLRQPSNMTHPGRGSVTSFYSTQRKLYSTDLPSSRAPAWQMNRKSPVPEKTSVVPSKI 180

  Fly   465 -------LKKATQVSQSQKKRGKNATEVAQSSLN------STAAIIDEFPA--KDL--DFLHNFS 512
                   |||.:.....||...:...|:.|..:.      |:...:.:.|.  |.:  :.||...
Zfish   181 NTNIKTPLKKTSGTPAQQKPVNRADVELVQGRIKQLLQKYSSGVWLSKIPQLYKSMFQEELHIIQ 245

  Fly   513 SLDITKRNKTTEDSSDWFKTDTL-------------VRVRS--VQSPEDFYVQGIHAAQRLREEL 562
            .::......|.|........|.|             |.|:|  .|||....::.....|:.....
Zfish   246 EVEKWTHICTVEKPGSNNIVDRLVYPVLEPVPKASPVPVKSPCKQSPNTALLKQPTLTQKTTRTF 310

  Fly   563 DTFA-------------------------HTLSDSSSV--------PPTIVVGQNYIIHHKDKDR 594
            .|.|                         .|||::...        |.|....|......|.|.|
Zfish   311 RTLAINIPQSTPKPQTPLSPTSPNSTMMDFTLSETPKTQSLSPITPPSTPPAHQPLTTELKQKLR 375

  Fly   595 YYRALVSQKLTNENLYNVFLTDIGVHLHVRCSDFRVVPERISHLPYSAVHCSLSELMPKNGESEW 659
            ......||.|....|..:|....|      |:..:.|.|.:|.|   |..|.:...||.|.    
Zfish   376 QLLNKYSQGLWAHGLPQLFQEAFG------CAFPQYVLEDLSLL---ADTCMVEYPMPDNR---- 427

  Fly   660 DSKASAFLKQIVQNNPVRVIVKKALTYELHGVDLITSNYDTNISVRDSFLYCGLAIS-RDGAPLW 723
                                 |:|:.|.|.                     |.:... |...|..
Zfish   428 ---------------------KRAILYTLP---------------------CQVQTQPRSRPPPL 450

  Fly   724 LPPAPTALRLPRISFRFGDVYMVQMLHVEDPQEFYV--MRHDYEKKRLWLQFSLQEAMDRINISQ 786
            :.|..:...:|.:.....|.:.|.::.:.......|  ....|.|       || |.|:    .:
Zfish   451 VLPCTSNPHVPPLIIPTADFHSVFVIEINSTNNVVVRFAGEGYSK-------SL-EVME----EE 503

  Fly   787 LQNIF-------------LGQLHLGCVLQSGGQWKRASIEQILPDGYVLVHLVDEG----PSQKV 834
            :||.:             :||  |..|..|.|...||.:.|:..| .|.|:.:|.|    .|:|.
Zfish   504 MQNFYNNIGAGLCLLSPKIGQ--LVAVASSDGAMLRAQVHQLSED-KVKVYFLDHGFFDLVSRKT 565

  Fly   835 FW---DQLFVLPQKFWDTGLAIKCCLADVETRAEHSYTWTPEGTTLFKQLTSNPRLYMDVISCTE 896
            .:   ||...||.:      |..|.||.:|     .::..|......:.|.....|..:::. .|
Zfish   566 VFQLRDQFMTLPFQ------ATTCQLAGLE-----PFSTDPVVLKTLQSLAVGRSLLAEIVE-RE 618

  Fly   897 DLVYVSLHFERSNSETTSVGVQLVAHGHCTSSGESSRMITPTVSNRSVRFDEETKKFIAQQKVRP 961
            |...|.|:   ..||...|.|..:    |..:.:...|..|...|                    
Zfish   619 DTPLVVLY---DTSENDDVNVTAM----CLKALQDKSMENPLQVN-------------------- 656

  Fly   962 VELSPYRMPDNTERNKRTTVNILYVRKPDEFYVTLPHFQKAINNLQKSVQKAAAAMYQNMLPRTD 1026
               |.|           |.|.:..|......|..||...:|  .|:..:.|..|    :.:.:..
Zfish   657 ---SVY-----------TNVCVTNVCSDGSVYCQLPSRGQA--KLKDIMDKIEA----HFISQLT 701

  Fly  1027 WQV-------GDMCYARVQANCDSQALWYRGVVTGVIPPGITCPIVRYQVHLRDLGELIDDVHSS 1084
            |::       |.:|.|:.:..      |.|                         .|:| ::|.|
Zfish   702 WELLVSRPFCGKVCLAKYKGK------WAR-------------------------AEII-NLHGS 734

  Fly  1085 SLANIDEADMRISSSAKRCHLHGIRPIGDEWSKDAIDFFMDQLKA-YNEIHVTGRGRTENSLSVI 1148
            .:.:|...|:.:.:|.:...|..|.||   :.|:.|......:|. ..:::|   .|.......:
Zfish   735 HVLDILFLDLGLPASLEVSELREIPPI---FLKELITIPPQAIKCLLEDLNV---DRAVWPPEAV 793

  Fly  1149 LWGSLSILTGPFSPATIKYVNINKA------LLMAGMAEKDHNSDSEDDQQSMPENVSVNSEEAA 1207
            ||  |.......:|:.:|.|.:::.      |.....|:..|:              ||| .:.|
Zfish   794 LW--LRETVHNKAPSCMKIVKLDETRTVHIYLFCGNEAQDIHD--------------SVN-RQLA 841

  Fly  1208 KANDWESCLSKIDGTSKTNDSLNLI-------------ESRSVTVGFEHNEDMPPLALLEDLGNT 1259
            ....|:..:.    .:|.|.:..|.             .|.::|        :||...|..:|. 
Zfish   842 SCPFWKQDVY----ANKINKASELFLPDAGEPSGPSPAPSNALT--------LPPQLNLPLVGQ- 893

  Fly  1260 KNTTGETTPPAGWTTRRKCDKSVFTAIATNVTYECCIYLTLASDKPFIEHMGNLLVREYKPL--- 1321
                               :..||.::|       |             |.|:.:::.::.|   
Zfish   894 -------------------NMDVFVSVA-------C-------------HPGHFVLQPWQDLYKL 919

  Fly  1322 ----------MDKQK------ERSTSYTYKVGQAVVVTYHMDNMIYRGIVQRLENNHNEYTVYYV 1370
                      .:||:      :::..|..|:          ||..:|.:|:.|..| ...:||.:
Zfish   920 VVLMGEMVLFYNKQEVTPVDIQKNNVYAAKI----------DNNWHRVLVKGLLTN-GLVSVYEL 973

  Fly  1371 DYGNMELVKADEMLP------YAPFPDLNA 1394
            |||..||:...::.|      ..||..::|
Zfish   974 DYGKYELINYTQLQPLIEEFRQLPFQGISA 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qinNP_650735.3 zf-RING_5 25..75 CDD:291308
BBOX 139..174 CDD:197662
TUDOR 536..648 CDD:278965 31/146 (21%)
TUDOR 741..859 CDD:278965 34/139 (24%)
TUDOR <805..839 CDD:119391 12/40 (30%)
TUDOR 981..1107 CDD:278965 23/132 (17%)
TUDOR 1296..1403 CDD:278965 24/124 (19%)
TUDOR 1337..1385 CDD:119391 13/47 (28%)
TUDOR 1710..1761 CDD:119391
tdrd7aNP_001092813.1 LOTUS_1_TDRD7 4..91 CDD:193600 16/91 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..175 5/21 (24%)
LOTUS_2_TDRD7 206..271 CDD:193587 11/64 (17%)
LOTUS_3_TDRD7 367..434 CDD:193588 21/100 (21%)
TUDOR 465..587 CDD:278965 34/142 (24%)
TUDOR 520..573 CDD:197660 17/55 (31%)
TUDOR 659..778 CDD:278965 31/170 (18%)
TUDOR 712..757 CDD:119391 13/76 (17%)
TUDOR 891..1007 CDD:278965 29/164 (18%)
TUDOR 945..988 CDD:119391 15/53 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.