DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qin and tej

DIOPT Version :9

Sequence 1:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster
Sequence 2:NP_610950.2 Gene:tej / 36590 FlyBaseID:FBgn0033921 Length:559 Species:Drosophila melanogaster


Alignment Length:636 Identity:120/636 - (18%)
Similarity:200/636 - (31%) Gaps:184/636 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 SKVDENPYRVTCSRFM-DISNIFKCEFVNPNIQVCFKTDLEISRSL----SSSPKGEITFLTSSS 444
            |.|..:|.::|..:.| |..:...|..  |..::.||......||:    :.:..|::.::|:.:
  Fly    16 SLVVSSPGKLTVEQLMRDYRSEEGCTL--PYSKLGFKDAESFLRSIPDTVTVTGHGQMAWITAVA 78

  Fly   445 SSKENFDPHSRKLLLAQNSKLKKATQVSQSQKKRGKNATEVAQSSLNSTAAIIDEFPAKDLDFLH 509
            ::|   ..|.:||:..|    ||:       |.||.:..:...:|..|....|:|..:|..:...
  Fly    79 TAK---SAHIQKLVRCQ----KKS-------KNRGSHKPKYCYASEPSNLVFINESVSKMKNRKA 129

  Fly   510 NFSSLDITKRNKTTEDSSDWFKTDTLVRVRSVQSPE-DFYVQGIHAAQRLREELDTFAHTLSDSS 573
            .|.:..:.:..|......::.:.     :..|.:|. |..:........||.:..:|....:..|
  Fly   130 PFPTYQVPRNLKLPVSYPNYNRL-----LYPVHTPHIDQMISTGQQQSTLRTQRPSFPCNANSKS 189

  Fly   574 SVPPTIVVGQNYIIHHKDKDRYYRALVSQKLTNENLYNVFLTDIGVHLHVRCSDFRVVPERISHL 638
                         :...|..:..|.....|..|...|....|:                      
  Fly   190 -------------LKVNDWSQKDRKQEPSKERNNQKYPKITTE---------------------- 219

  Fly   639 PYSAVHCSLSELMPKNGESEWDSKASAFLKQIVQNNPVRVIVKKALTYELHGVDLITSNYDTNIS 703
                          ...|.|.:..|.||....|...|..           |...|....|:.|..
  Fly   220 --------------NKQEKETEELAQAFENLSVDVAPTD-----------HQEKLKCEIYEDNED 259

  Fly   704 --VRDSFLYCGL-------------AISRDGAPLW------------LPPAPTALR--------- 732
              |||.|:|..:             |:|.||..|.            |.|....|.         
  Fly   260 EFVRDPFIYGEVKEKEDEAVVLAFDAVSEDGFDLLSMTTTQQNAVKPLDPPEDCLHYASSDDGED 324

  Fly   733 -----------------LPRISFRFG------DV---------YMVQMLHVEDPQEFYVMRHDYE 765
                             .||.:.|..      |:         ..||::.:.:|..|....::.:
  Fly   325 ENAIPAYAVDHRVLDVDYPRDAVRSAFTLPARDIESIIELQQRIRVQLVSLVNPHNFNFWIYNDD 389

  Fly   766 KKRLWLQFSLQEAMDRINISQLQN----IFLGQLHLGCVLQSGGQWKRASIEQILPDGY------ 820
            .|....||:..:..  ...|:.:|    :||......||::....|:||.:.     ||      
  Fly   390 FKDYEAQFANMQTF--YESSESKNYTMPLFLITTDHLCVVRCTSGWERAKVL-----GYRSSNNK 447

  Fly   821 --VLVHLVDEGPSQKVFWDQLFVLPQKFWDTGLAIKCCLAD---VETRAEHSYTWTPEGTTLFKQ 880
              :.|.|||.|...:|....:..|.:.|   .|..:.|||.   ..|:.: |..||.|....|..
  Fly   448 MTIEVELVDIGDIIRVSQQNVKFLIKPF---ALLPRQCLAGRLAFITQCK-SPNWTAEVVNFFHD 508

  Fly   881 LTSNPRLYMDVISCTEDLVYVSLHFERSNSETTSVGVQLVAHG---HCTSS 928
            :.....||..|.:...:..|:.|....|...|.::...|:..|   .|||:
  Fly   509 MILLRLLYAKVEAIKNNTAYLVLVDTESQGHTVNLNRSLIETGWVRRCTSA 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qinNP_650735.3 zf-RING_5 25..75 CDD:291308
BBOX 139..174 CDD:197662
TUDOR 536..648 CDD:278965 13/112 (12%)
TUDOR 741..859 CDD:278965 30/144 (21%)
TUDOR <805..839 CDD:119391 11/41 (27%)
TUDOR 981..1107 CDD:278965
TUDOR 1296..1403 CDD:278965
TUDOR 1337..1385 CDD:119391
TUDOR 1710..1761 CDD:119391
tejNP_610950.2 LOTUS_TDRD_OSKAR 7..93 CDD:193586 19/85 (22%)
TUDOR 379..488 CDD:278965 27/118 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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